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    DDX54 DEAD-box helicase 54 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 712763, updated on 17-Aug-2024

    Summary

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    Official Symbol
    DDX54provided by VGNC
    Official Full Name
    DEAD-box helicase 54provided by VGNC
    Primary source
    VGNC:VGNC:71680
    See related
    Ensembl:ENSMMUG00000021795
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See DDX54 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (112869599..112898431, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (113186168..113215334, complement)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene deltex E3 ubiquitin ligase 1 Neighboring gene uncharacterized LOC114670954 Neighboring gene RAS protein activator like 1 Neighboring gene cilia and flagella associated protein 73 Neighboring gene RBPJ interacting and tubulin associated 1 Neighboring gene IQ motif containing D

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ATP-dependent RNA helicase DDX54
    XP_001111246.2
    XP_015008364.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      112869599..112898431 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001111246.4 → XP_001111246.2  ATP-dependent RNA helicase DDX54 isoform X2

      UniProtKB/TrEMBL
      F7ET69
      Conserved Domains (3) summary
      PRK01297
      Location:1 → 466
      PRK01297; ATP-dependent RNA helicase RhlB; Provisional
      pfam08147
      Location:716 → 776
      DBP10CT; DBP10CT (NUC160) domain
      cd17959
      Location:96 → 300
      DEADc_DDX54; DEAD-box helicase domain of DEAD box protein 54

    2. XM_015152878.2 → XP_015008364.2  ATP-dependent RNA helicase DDX54 isoform X1

      UniProtKB/TrEMBL
      F7ET69, F7ET79, H9ZDF2
      Related
      ENSMMUP00000028704.4, ENSMMUT00000030669.4
      Conserved Domains (3) summary
      PRK01297
      Location:1 → 466
      PRK01297; ATP-dependent RNA helicase RhlB; Provisional
      pfam08147
      Location:716 → 776
      DBP10CT; DBP10CT (NUC160) domain
      cd17959
      Location:96 → 300
      DEADc_DDX54; DEAD-box helicase domain of DEAD box protein 54
    Nucleotide Protein
    Heading Accession and Version

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