U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    WARS1 tryptophanyl-tRNA synthetase 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 706855, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    WARS1provided by VGNC
    Official Full Name
    tryptophanyl-tRNA synthetase 1provided by VGNC
    Primary source
    VGNC:VGNC:78779
    See related
    Ensembl:ENSMMUG00000059881
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    WARS
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See WARS1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (162551773..162596392, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (162662895..162708200, complement)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene microRNA mir-345 Neighboring gene solute carrier family 25 member 47 Neighboring gene WD repeat domain 25 Neighboring gene brain enriched guanylate kinase associated Neighboring gene uncharacterized LOC114679294

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables tryptophan-tRNA ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tryptophanyl-tRNA aminoacylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    tryptophan--tRNA ligase, cytoplasmic
    Names
    tryptophanyl-tRNA synthetase, cytoplasmic

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      162551773..162596392 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001105363.4 → XP_001105363.2  tryptophan--tRNA ligase, cytoplasmic isoform X2

      UniProtKB/TrEMBL
      A0A5F8AF85, I0FUW1
      Related
      ENSMMUP00000076538.1, ENSMMUT00000092754.1
      Conserved Domains (2) summary
      PLN02486
      Location:44 → 425
      PLN02486; aminoacyl-tRNA ligase
      cl00349
      Location:2 → 23
      S15_NS1_EPRS_RNA-bind; S15/NS1/EPRS_RNA-binding domain. This short domain consists of a helix-turn-helix structure, which can bind to several types of RNA. It is found in the ribosomal protein S15, the influenza A viral nonstructural protein (NSA) and in several eukaryotic ...

    2. XM_001105786.4 → XP_001105786.2  tryptophan--tRNA ligase, cytoplasmic isoform X1

      UniProtKB/TrEMBL
      F6QVM3, G7MW56
      Related
      ENSMMUP00000065660.1, ENSMMUT00000108633.1
      Conserved Domains (2) summary
      PLN02486
      Location:89 → 470
      PLN02486; aminoacyl-tRNA ligase
      pfam00458
      Location:16 → 68
      WHEP-TRS; WHEP-TRS domain

    3. XM_001105926.4 → XP_001105926.2  tryptophan--tRNA ligase, cytoplasmic isoform X1

      UniProtKB/TrEMBL
      F6QVM3, G7MW56
      Related
      ENSMMUP00000032577.3, ENSMMUT00000039489.3
      Conserved Domains (2) summary
      PLN02486
      Location:89 → 470
      PLN02486; aminoacyl-tRNA ligase
      pfam00458
      Location:16 → 68
      WHEP-TRS; WHEP-TRS domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.