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    TET2 tet methylcytosine dioxygenase 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 694137, updated on 18-Sep-2024

    Summary

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    Official Symbol
    TET2provided by VGNC
    Official Full Name
    tet methylcytosine dioxygenase 2provided by VGNC
    Primary source
    VGNC:VGNC:100278
    See related
    Ensembl:ENSMMUG00000017831
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TET2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (103636034..103768093)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (105087660..105220083, complement)

    Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene nucleoporin Nup43 pseudogene Neighboring gene inorganic pyrophosphatase 2 Neighboring gene protein PIMREG pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 5-methylcytosine dioxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in myeloid cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in oxidative demethylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    methylcytosine dioxygenase TET2
    Names
    tet oncogene family member 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041758.1 Reference Mmul_10 Primary Assembly

      Range
      103636034..103768093
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015138929.2 → XP_014994415.2  methylcytosine dioxygenase TET2

      UniProtKB/TrEMBL
      F7DR39, F7DR47, G7MTJ8
      Conserved Domains (1) summary
      pfam12851
      Location:1288 → 1415
      Tet_JBP; Oxygenase domain of the 2OGFeDO superfamily

    2. XM_015138928.2 → XP_014994414.2  methylcytosine dioxygenase TET2

      UniProtKB/TrEMBL
      F7DR39, F7DR47, G7MTJ8
      Related
      ENSMMUP00000023440.4, ENSMMUT00000025055.4
      Conserved Domains (1) summary
      pfam12851
      Location:1288 → 1415
      Tet_JBP; Oxygenase domain of the 2OGFeDO superfamily

    3. XM_028848654.1 → XP_028704487.1  methylcytosine dioxygenase TET2

      UniProtKB/TrEMBL
      F7DR39, F7DR47, G7MTJ8
      Related
      ENSMMUP00000023441.3, ENSMMUT00000025056.3
      Conserved Domains (1) summary
      pfam12851
      Location:1288 → 1415
      Tet_JBP; Oxygenase domain of the 2OGFeDO superfamily

    4. XM_015138927.2 → XP_014994413.2  methylcytosine dioxygenase TET2

      UniProtKB/TrEMBL
      F7DR39, F7DR47, G7MTJ8
      Conserved Domains (1) summary
      pfam12851
      Location:1288 → 1415
      Tet_JBP; Oxygenase domain of the 2OGFeDO superfamily
    Nucleotide Protein
    Heading Accession and Version

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