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    TBCE tubulin folding cofactor E [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 711476, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TBCEprovided by VGNC
    Official Full Name
    tubulin folding cofactor Eprovided by VGNC
    Primary source
    VGNC:VGNC:112164
    Locus tag
    EGK_02115
    See related
    Ensembl:ENSMMUG00000008426
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    B3GALNT2
    Orthologs
    human mouse all
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    Genomic context

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    See TBCE in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (13582830..13663737, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (211651229..211733981)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114678826 Neighboring gene G protein subunit gamma 4 Neighboring gene NADH-ubiquinone oxidoreductase chain 5-like Neighboring gene beta-1,3-N-acetylgalactosaminyltransferase 2 Neighboring gene geranylgeranyl diphosphate synthase 1 Neighboring gene AT-rich interaction domain 4B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables alpha-tubulin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein folding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tubulin-specific chaperone E
    Names
    UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001265678.1 → NP_001252607.1  tubulin-specific chaperone E

      See identical proteins and their annotated locations for NP_001252607.1

      Status: PROVISIONAL

      Source sequence(s)
      JV489105
      UniProtKB/TrEMBL
      A0A1D5RD38, A0A5F8A914, A0A8J8YD04, G7MFP1, H9EXU8
      Related
      ENSMMUP00000074364.1, ENSMMUT00000080038.1
      Conserved Domains (5) summary
      smart01052
      Location:10 → 75
      CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
      cd00116
      Location:124 → 267
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:129 → 154
      LRR_RI; leucine-rich repeat [structural motif]
      pfam12799
      Location:307 → 346
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:153 → 216
      LRR_8; Leucine rich repeat

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      13582830..13663737 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015126572.2 → XP_014982058.1  tubulin-specific chaperone E isoform X2

      UniProtKB/TrEMBL
      A0A1D5RD38, A0A5F8A914, A0A8J8YD04, G7MFP1, H9EXU8
      Conserved Domains (5) summary
      smart01052
      Location:10 → 75
      CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
      cd00116
      Location:124 → 267
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:129 → 154
      LRR_RI; leucine-rich repeat [structural motif]
      pfam12799
      Location:307 → 346
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:153 → 216
      LRR_8; Leucine rich repeat

    2. XM_028844441.1 → XP_028700274.1  tubulin-specific chaperone E isoform X3

      Conserved Domains (3) summary
      COG4886
      Location:54 → 250
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:10 → 35
      LRR_RI; leucine-rich repeat [structural motif]
      cd17044
      Location:325 → 407
      Ubl_TBCE; ubiquitin-like (Ubl) domain found in tubulin-folding cofactor E (TBCE) and similar proteins

    3. XM_028844444.1 → XP_028700277.1  tubulin-specific chaperone E isoform X3

      Conserved Domains (3) summary
      COG4886
      Location:54 → 250
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:10 → 35
      LRR_RI; leucine-rich repeat [structural motif]
      cd17044
      Location:325 → 407
      Ubl_TBCE; ubiquitin-like (Ubl) domain found in tubulin-folding cofactor E (TBCE) and similar proteins

    4. XM_015126553.2 → XP_014982039.1  tubulin-specific chaperone E isoform X1

      UniProtKB/TrEMBL
      A0A1D5RD38
      Conserved Domains (5) summary
      smart01052
      Location:10 → 75
      CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
      cd00116
      Location:124 → 267
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:129 → 154
      LRR_RI; leucine-rich repeat [structural motif]
      pfam12799
      Location:307 → 346
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:153 → 216
      LRR_8; Leucine rich repeat

    5. XM_015126560.2 → XP_014982046.1  tubulin-specific chaperone E isoform X1

      UniProtKB/TrEMBL
      A0A1D5RD38
      Conserved Domains (5) summary
      smart01052
      Location:10 → 75
      CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
      cd00116
      Location:124 → 267
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:129 → 154
      LRR_RI; leucine-rich repeat [structural motif]
      pfam12799
      Location:307 → 346
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:153 → 216
      LRR_8; Leucine rich repeat

    6. XM_015126567.2 → XP_014982053.1  tubulin-specific chaperone E isoform X1

      UniProtKB/TrEMBL
      A0A1D5RD38
      Conserved Domains (5) summary
      smart01052
      Location:10 → 75
      CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
      cd00116
      Location:124 → 267
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:129 → 154
      LRR_RI; leucine-rich repeat [structural motif]
      pfam12799
      Location:307 → 346
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:153 → 216
      LRR_8; Leucine rich repeat

    RNA

    1. XR_003727395.1 RNA Sequence

      Related
      ENSMMUT00000096455.1
    Nucleotide Protein
    Heading Accession and Version

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