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    ZSCAN25 zinc finger and SCAN domain containing 25 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 709125, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ZSCAN25provided by VGNC
    Official Full Name
    zinc finger and SCAN domain containing 25provided by VGNC
    Primary source
    VGNC:VGNC:79344
    See related
    Ensembl:ENSMMUG00000022728
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    ZNF498
    Orthologs
    human mouse all
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    Genomic context

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    See ZSCAN25 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (41723388..41793697)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (125055377..125070770)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 655 Neighboring gene transmembrane protein 225B Neighboring gene cytochrome P450, family 3, subfamily A, polypeptide 5 Neighboring gene cytochrome P450 family 3 subfamily A member 7 Neighboring gene uncharacterized LOC114676874 Neighboring gene cytochrome P450 3A7-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in central nervous system development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger and SCAN domain-containing protein 25
    Names
    zinc finger protein 498

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257455.1 → NP_001244384.1  zinc finger and SCAN domain-containing protein 25

      See identical proteins and their annotated locations for NP_001244384.1

      Status: PROVISIONAL

      Source sequence(s)
      JU333410
      UniProtKB/TrEMBL
      A0A1D5QSQ4, F7GIA5
      Conserved Domains (6) summary
      cd07765
      Location:231 → 266
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      COG5048
      Location:324 → 533
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:406 → 426
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:348 → 370
      zf-C2H2; Zinc finger, C2H2 type
      pfam02023
      Location:38 → 123
      SCAN; SCAN domain
      pfam13465
      Location:502 → 526
      zf-H2C2_2; Zinc-finger double domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      41723388..41793697
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028844976.1 → XP_028700809.1  zinc finger and SCAN domain-containing protein 25 isoform X3

      Conserved Domains (2) summary
      cd07765
      Location:231 → 266
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      pfam02023
      Location:38 → 123
      SCAN; SCAN domain

    2. XM_015134319.2 → XP_014989805.1  zinc finger and SCAN domain-containing protein 25 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QSQ4, F7GIA5
      Related
      ENSMMUP00000051082.2, ENSMMUT00000058636.2
      Conserved Domains (6) summary
      cd07765
      Location:231 → 266
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      COG5048
      Location:324 → 533
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:406 → 426
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:348 → 370
      zf-C2H2; Zinc finger, C2H2 type
      pfam02023
      Location:38 → 123
      SCAN; SCAN domain
      pfam13465
      Location:502 → 526
      zf-H2C2_2; Zinc-finger double domain

    3. XM_015134322.2 → XP_014989808.1  zinc finger and SCAN domain-containing protein 25 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QSQ4, F7GIA5
      Related
      ENSMMUP00000029927.2, ENSMMUT00000031984.4
      Conserved Domains (6) summary
      cd07765
      Location:231 → 266
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      COG5048
      Location:324 → 533
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:406 → 426
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:348 → 370
      zf-C2H2; Zinc finger, C2H2 type
      pfam02023
      Location:38 → 123
      SCAN; SCAN domain
      pfam13465
      Location:502 → 526
      zf-H2C2_2; Zinc-finger double domain

    4. XM_028844975.1 → XP_028700808.1  zinc finger and SCAN domain-containing protein 25 isoform X2

      Conserved Domains (4) summary
      cd07765
      Location:67 → 102
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      COG5048
      Location:160 → 341
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:242 → 262
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:337 → 362
      zf-H2C2_2; Zinc-finger double domain

    5. XM_015134320.2 → XP_014989806.1  zinc finger and SCAN domain-containing protein 25 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QSQ4, F7GIA5
      Conserved Domains (6) summary
      cd07765
      Location:231 → 266
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      COG5048
      Location:324 → 533
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:406 → 426
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:348 → 370
      zf-C2H2; Zinc finger, C2H2 type
      pfam02023
      Location:38 → 123
      SCAN; SCAN domain
      pfam13465
      Location:502 → 526
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
    Heading Accession and Version

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