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    TRAF3IP2 TRAF3 interacting protein 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 697530, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TRAF3IP2provided by VGNC
    Official Full Name
    TRAF3 interacting protein 2provided by VGNC
    Primary source
    VGNC:VGNC:78921
    See related
    Ensembl:ENSMMUG00000002174
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TRAF3IP2 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (15197632..15245103, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (156349867..156397515)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene REV3 like, DNA directed polymerase zeta catalytic subunit Neighboring gene bromodomain-containing protein 7 pseudogene Neighboring gene uncharacterized LOC100427957 Neighboring gene uncharacterized LOC106998176 Neighboring gene uncharacterized LOC114677463 Neighboring gene small nucleolar RNA U13 Neighboring gene histone H3.3-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in humoral immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of canonical NF-kappaB signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin ligase TRAF3IP2; adapter protein CIKS
    NP_001253065.1
    XP_014992741.2
    XP_014992742.1
    XP_028702488.1
    XP_028702489.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266136.1 → NP_001253065.1  E3 ubiquitin ligase TRAF3IP2

      See identical proteins and their annotated locations for NP_001253065.1

      Status: PROVISIONAL

      Source sequence(s)
      JU474061
      UniProtKB/TrEMBL
      A0A1D5QEG8, A0A1D5RC24
      Related
      ENSMMUP00000057866.2, ENSMMUT00000062185.2
      Conserved Domains (1) summary
      pfam08357
      Location:399 → 541
      SEFIR; SEFIR domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      15197632..15245103 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015137255.2 → XP_014992741.2  adapter protein CIKS isoform X1

      UniProtKB/TrEMBL
      G7MQQ7
      Conserved Domains (2) summary
      PRK03427
      Location:277 → 395
      PRK03427; cell division protein ZipA; Provisional
      pfam08357
      Location:408 → 550
      SEFIR; SEFIR domain

    2. XM_015137256.2 → XP_014992742.1  adapter protein CIKS isoform X2

      Conserved Domains (1) summary
      pfam08357
      Location:1 → 135
      SEFIR; SEFIR domain

    3. XM_028846656.1 → XP_028702489.1  adapter protein CIKS isoform X4

      Conserved Domains (1) summary
      cl23749
      Location:1 → 87
      TIR_2; TIR domain

    4. XM_028846655.1 → XP_028702488.1  adapter protein CIKS isoform X3

      Conserved Domains (1) summary
      cl23749
      Location:2 → 91
      TIR_2; TIR domain
    Nucleotide Protein
    Heading Accession and Version

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