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    SLC6A6 solute carrier family 6 member 6 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 701172, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SLC6A6provided by VGNC
    Official Full Name
    solute carrier family 6 member 6provided by VGNC
    Primary source
    VGNC:VGNC:77622
    See related
    Ensembl:ENSMMUG00000006340
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SLC6A6 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (145752859..145840458)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (51911742..51999199, complement)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114676397 Neighboring gene 5S ribosomal RNA Neighboring gene glutamate receptor interacting protein 2 Neighboring gene U6 spliceosomal RNA Neighboring gene inactive rhomboid protein 1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables taurine:sodium symporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in neurotransmitter transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sodium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in taurine transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sodium- and chloride-dependent taurine transporter
    Names
    solute carrier family 6 (neurotransmitter transporter, taurine), member 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266893.1 → NP_001253822.1  sodium- and chloride-dependent taurine transporter

      See identical proteins and their annotated locations for NP_001253822.1

      Status: PROVISIONAL

      Source sequence(s)
      JU470902
      UniProtKB/TrEMBL
      F7D2B9, G7N7T1
      Related
      ENSMMUP00000039038.3, ENSMMUT00000045999.3
      Conserved Domains (1) summary
      cd11510
      Location:41 → 582
      SLC6sbd_TauT; Na(+)- and Cl(-)-dependent taurine transporter; solute-binding domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      145752859..145840458
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028843176.1 → XP_028699009.1  sodium- and chloride-dependent taurine transporter isoform X1

      UniProtKB/TrEMBL
      F7HEB3, G7N7T1, H9FYN4
      Related
      ENSMMUP00000068098.1, ENSMMUT00000104667.1
      Conserved Domains (1) summary
      cd11510
      Location:70 → 611
      SLC6sbd_TauT; Na(+)- and Cl(-)-dependent taurine transporter; solute-binding domain

    2. XM_028843177.1 → XP_028699010.1  sodium- and chloride-dependent taurine transporter isoform X2

      UniProtKB/TrEMBL
      F7D2B9, G7N7T1
      Conserved Domains (1) summary
      cd11510
      Location:41 → 582
      SLC6sbd_TauT; Na(+)- and Cl(-)-dependent taurine transporter; solute-binding domain
    Nucleotide Protein
    Heading Accession and Version

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