U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    TMOD3 tropomodulin 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 694478, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    TMOD3provided by VGNC
    Official Full Name
    tropomodulin 3provided by VGNC
    Primary source
    VGNC:VGNC:78572
    Locus tag
    EGK_17498
    See related
    Ensembl:ENSMMUG00000002345
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TMOD3 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (28205642..28285518)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (28206197..28286937)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106999184 Neighboring gene secretogranin III Neighboring gene LysM domain containing 2 Neighboring gene tropomodulin 2 Neighboring gene U3 small nucleolar RNA-associated protein 6 homolog pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC114679403 Neighboring gene RNA polymerase-associated protein LEO1-like Neighboring gene RNA polymerase-associated protein LEO1 Neighboring gene mitogen-activated protein kinase 6

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables tropomyosin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in muscle contraction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in myofibril assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in pointed-end actin filament capping IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in myofibril IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in striated muscle thin filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    tropomodulin-3
    Names
    Ubiquitous tropomodulin
    tropomodulin 3 (ubiquitous)

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266419.1 → NP_001253348.1  tropomodulin-3

      See identical proteins and their annotated locations for NP_001253348.1

      Status: PROVISIONAL

      Source sequence(s)
      JV046870
      UniProtKB/TrEMBL
      A0A5F7ZW37, A0A8J8Y580, F7C5M5, G7MXB6
      Related
      ENSMMUP00000003140.2, ENSMMUT00000003326.4
      Conserved Domains (2) summary
      cd00116
      Location:216 → 292
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      pfam03250
      Location:5 → 146
      Tropomodulin; Tropomodulin

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      28205642..28285518
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015142196.2 → XP_014997682.1  tropomodulin-3 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZW37, A0A8J8Y580, F7C5M5, G7MXB6
      Related
      ENSMMUP00000068850.1, ENSMMUT00000095001.1
      Conserved Domains (2) summary
      cd00116
      Location:216 → 292
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      pfam03250
      Location:5 → 146
      Tropomodulin; Tropomodulin
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.