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    CD164 CD164 molecule [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699242, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CD164provided by VGNC
    Official Full Name
    CD164 moleculeprovided by VGNC
    Primary source
    VGNC:VGNC:70753
    Locus tag
    EGK_15457
    See related
    Ensembl:ENSMMUG00000007011
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CD164 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (13032328..13049876, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (158558626..158575293)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain-containing protein 162-like Neighboring gene small nucleolar RNA U13 Neighboring gene 60S ribosomal protein L7-like 1 Neighboring gene peptidylprolyl isomerase like 6 Neighboring gene sphingomyelin phosphodiesterase 2 Neighboring gene microtubule associated monooxygenase, calponin and LIM domain containing 1 Neighboring gene zinc finger and BTB domain containing 24

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in lysosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sialomucin core protein 24

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001265743.1 → NP_001252672.1  sialomucin core protein 24 precursor

      See identical proteins and their annotated locations for NP_001252672.1

      Status: PROVISIONAL

      Source sequence(s)
      JV600199
      UniProtKB/TrEMBL
      A0A8J8XHG4, F7F5W1, F7F654, G7MQX9, H9ZET7
      Conserved Domains (1) summary
      pfam05283
      Location:60 → 197
      MGC-24; Multi-glycosylated core protein 24 (MGC-24), sialomucin

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      13032328..13049876 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015137258.2 → XP_014992744.1  sialomucin core protein 24 isoform X2

      UniProtKB/TrEMBL
      A0A5F8AMX9, F7F631
      Related
      ENSMMUP00000068173.1, ENSMMUT00000109480.1
      Conserved Domains (1) summary
      pfam05283
      Location:60 → 184
      MGC-24; Multi-glycosylated core protein 24 (MGC-24), sialomucin

    2. XM_015137259.2 → XP_014992745.1  sialomucin core protein 24 isoform X3

      UniProtKB/TrEMBL
      F7F5W1, H9ZET7
      Related
      ENSMMUP00000079287.1, ENSMMUT00000103040.1
      Conserved Domains (1) summary
      pfam05283
      Location:60 → 178
      MGC-24; Multi-glycosylated core protein 24 (MGC-24), sialomucin

    3. XM_015137257.2 → XP_014992743.1  sialomucin core protein 24 isoform X1

      UniProtKB/TrEMBL
      F7F5W1, H9G1A7, H9ZET7
      Related
      ENSMMUP00000072203.1, ENSMMUT00000101879.1
      Conserved Domains (1) summary
      pfam05283
      Location:60 → 198
      MGC-24; Multi-glycosylated core protein 24 (MGC-24), sialomucin

    4. XM_028846677.1 → XP_028702510.1  sialomucin core protein 24 isoform X4

      UniProtKB/TrEMBL
      A0A5F7ZDL2
      Related
      ENSMMUP00000063709.1, ENSMMUT00000085028.1
      Conserved Domains (1) summary
      pfam05283
      Location:26 → 163
      MGC-24; Multi-glycosylated core protein 24 (MGC-24), sialomucin
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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