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    ITFG1 integrin alpha FG-GAP repeat containing 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 716435, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ITFG1provided by VGNC
    Official Full Name
    integrin alpha FG-GAP repeat containing 1provided by VGNC
    Primary source
    VGNC:VGNC:73688
    See related
    Ensembl:ENSMMUG00000004717
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ITFG1 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (34242780..34537664, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (30901681..31196882, complement)

    Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U13 Neighboring gene proline-rich proteoglycan 2-like Neighboring gene neuropilin and tolloid like 2 Neighboring gene proteasome subunit beta type-5 pseudogene Neighboring gene ETS domain-containing protein Elk-1 pseudogene Neighboring gene phosphorylase kinase regulatory subunit beta Neighboring gene uncharacterized LOC106994998 Neighboring gene uncharacterized LOC114674296 Neighboring gene ATP binding cassette subfamily C member 12

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    T-cell immunomodulatory protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041773.1 Reference Mmul_10 Primary Assembly

      Range
      34242780..34537664 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001114075.4 → XP_001114075.2  T-cell immunomodulatory protein

      UniProtKB/TrEMBL
      F6RCT6, H9F8C6, I2CYW2
      Related
      ENSMMUP00000006269.4, ENSMMUT00000006663.4
      Conserved Domains (1) summary
      pfam13517
      Location:55 → 118
      VCBS; Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella
    Nucleotide Protein
    Heading Accession and Version

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