U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    PES1 pescadillo ribosomal biogenesis factor 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 718122, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    PES1provided by VGNC
    Official Full Name
    pescadillo ribosomal biogenesis factor 1provided by VGNC
    Primary source
    VGNC:VGNC:75944
    See related
    Ensembl:ENSMMUG00000017562
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PES1 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (20953327..20969246)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (72420075..72435983, complement)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 35 member E4 Neighboring gene transcobalamin 2 Neighboring gene galactose-3-O-sulfotransferase 1 Neighboring gene SEC14 like lipid binding 6

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ribosome biogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of PeBoW complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    pescadillo homolog
    Names
    pescadillo homolog 1, containing BRCT domain

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      20953327..20969246
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028827843.1 → XP_028683676.1  pescadillo homolog isoform X2

      UniProtKB/TrEMBL
      G7N3L6
      Conserved Domains (2) summary
      COG5163
      Location:6 → 583
      NOP7; Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis]
      pfam06732
      Location:9 → 278
      Pescadillo_N; Pescadillo N-terminus

    2. XM_015150157.2 → XP_015005643.1  pescadillo homolog isoform X1

      UniProtKB/TrEMBL
      F6WSE9, I0FQE1, I2CWR8
      Related
      ENSMMUP00000023123.3, ENSMMUT00000024705.4
      Conserved Domains (3) summary
      COG5163
      Location:6 → 584
      NOP7; Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis]
      pfam06732
      Location:9 → 278
      Pescadillo_N; Pescadillo N-terminus
      pfam16589
      Location:328 → 414
      BRCT_2; BRCT domain, a BRCA1 C-terminus domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials