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    BLM BLM RecQ like helicase [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 703460, updated on 17-Aug-2024

    Summary

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    Official Symbol
    BLMprovided by VGNC
    Official Full Name
    BLM RecQ like helicaseprovided by VGNC
    Primary source
    VGNC:VGNC:70254
    See related
    Ensembl:ENSMMUG00000019526
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See BLM in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (69568526..69677147)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (68831506..68939965)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene ubiquitin-conjugating enzyme E2 Q2 Neighboring gene CREB regulated transcription coactivator 3 Neighboring gene uncharacterized LOC114679722 Neighboring gene 10 kDa heat shock protein, mitochondrial pseudogene Neighboring gene NEDD8-like Neighboring gene small nucleolar RNA SNORD18 Neighboring gene rho-related GTP-binding protein RhoG-like Neighboring gene S100 calcium binding protein A11 Neighboring gene uncharacterized LOC114679724 Neighboring gene uncharacterized LOC114679718

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 3'-5' DNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables four-way junction helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA replication IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in DNA unwinding involved in DNA replication IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in G-quadruplex DNA unwinding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in double-strand break repair via homologous recombination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in telomere maintenance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chromosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Bloom syndrome protein
    Names
    Bloom syndrome RecQ like helicase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      69568526..69677147
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001097543.4 → XP_001097543.2  Bloom syndrome protein isoform X1

      UniProtKB/TrEMBL
      F7CS38, G7MVY7
      Related
      ENSMMUP00000025651.4, ENSMMUT00000027428.4
      Conserved Domains (5) summary
      smart00341
      Location:1212 → 1291
      HRDC; Helicase and RNase D C-terminal
      TIGR00614
      Location:656 → 1142
      recQ_fam; ATP-dependent DNA helicase, RecQ family
      pfam08072
      Location:371 → 410
      BDHCT; BDHCT (NUC031) domain
      pfam16202
      Location:1 → 365
      BLM_N; N-terminal region of Bloom syndrome protein
      pfam16204
      Location:424 → 646
      BDHCT_assoc; BDHCT-box associated domain on Bloom syndrome protein

    2. XM_015143029.2 → XP_014998515.2  Bloom syndrome protein isoform X2

      UniProtKB/TrEMBL
      G7MVY7
      Conserved Domains (5) summary
      TIGR00614
      Location:656 → 1142
      recQ_fam; ATP-dependent DNA helicase, RecQ family
      pfam08072
      Location:371 → 410
      BDHCT; BDHCT (NUC031) domain
      pfam16202
      Location:1 → 365
      BLM_N; N-terminal region of Bloom syndrome protein
      pfam16204
      Location:424 → 646
      BDHCT_assoc; BDHCT-box associated domain on Bloom syndrome protein
      cl02578
      Location:1212 → 1249
      HRDC; HRDC domain

    3. XM_028852012.1 → XP_028707845.1  Bloom syndrome protein isoform X1

      UniProtKB/TrEMBL
      F7CS38, G7MVY7
      Conserved Domains (5) summary
      smart00341
      Location:1212 → 1291
      HRDC; Helicase and RNase D C-terminal
      TIGR00614
      Location:656 → 1142
      recQ_fam; ATP-dependent DNA helicase, RecQ family
      pfam08072
      Location:371 → 410
      BDHCT; BDHCT (NUC031) domain
      pfam16202
      Location:1 → 365
      BLM_N; N-terminal region of Bloom syndrome protein
      pfam16204
      Location:424 → 646
      BDHCT_assoc; BDHCT-box associated domain on Bloom syndrome protein

    4. XM_015143030.2 → XP_014998516.2  Bloom syndrome protein isoform X3

      Conserved Domains (4) summary
      smart00341
      Location:838 → 917
      HRDC; Helicase and RNase D C-terminal
      TIGR00614
      Location:282 → 768
      recQ_fam; ATP-dependent DNA helicase, RecQ family
      pfam08072
      Location:1 → 36
      BDHCT; BDHCT (NUC031) domain
      pfam16204
      Location:50 → 272
      BDHCT_assoc; BDHCT-box associated domain on Bloom syndrome protein
    Nucleotide Protein
    Heading Accession and Version

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