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    OMD osteomodulin [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 706272, updated on 5-Mar-2024

    Summary

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    Gene symbol
    OMD
    Gene description
    osteomodulin
    Locus tag
    EGK_07904
    See related
    Ensembl:ENSMMUG00000061517
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See OMD in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (107509432..107519462, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (42608988..42619057, complement)

    Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene nucleolar protein 8 Neighboring gene centromere protein P Neighboring gene osteoglycin Neighboring gene asporin Neighboring gene extracellular matrix protein 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    osteomodulin
    Names
    Osteoadherin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041768.1 Reference Mmul_10 Primary Assembly

      Range
      107509432..107519462 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001103677.4 → XP_001103677.1  osteomodulin

      See identical proteins and their annotated locations for XP_001103677.1

      UniProtKB/TrEMBL
      A0A5F7ZI43, F6TDZ4
      Related
      ENSMMUP00000065284.1, ENSMMUT00000107674.1
      Conserved Domains (4) summary
      smart00013
      Location:61 → 94
      LRRNT; Leucine rich repeat N-terminal domain
      cd00116
      Location:136 → 342
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:75 → 91
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:213 → 269
      LRR_8; Leucine rich repeat
    Nucleotide Protein
    Heading Accession and Version

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