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    SYT17 synaptotagmin 17 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 694130, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SYT17provided by VGNC
    Official Full Name
    synaptotagmin 17provided by VGNC
    Primary source
    VGNC:VGNC:78200
    See related
    Ensembl:ENSMMUG00000014757
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SYT17 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (17999391..18092584)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (18319002..18412505)

    Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114674482 Neighboring gene ITPRIP like 2 Neighboring gene C-type lectin domain containing 19A Neighboring gene transmembrane channel like 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium-dependent phospholipid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables clathrin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylserine binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables syntaxin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium-ion regulated exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to calcium ion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of calcium ion-dependent exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of dopamine secretion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    synaptotagmin-17
    Names
    synaptotagmin XVII

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041773.1 Reference Mmul_10 Primary Assembly

      Range
      17999391..18092584
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028841408.1 → XP_028697241.1  synaptotagmin-17 isoform X6

      UniProtKB/TrEMBL
      G7NPS1, H9F8M5
      Conserved Domains (2) summary
      cd08390
      Location:125 → 253
      C2A_Synaptotagmin-15-17; C2A domain first repeat present in Synaptotagmins 15 and 17
      cd08410
      Location:262 → 396
      C2B_Synaptotagmin-17; C2 domain second repeat present in Synaptotagmin 17

    2. XM_001082835.4 → XP_001082835.3  synaptotagmin-17 isoform X3

      UniProtKB/TrEMBL
      F7G138, H9F8M5, I2CYP2
      Related
      ENSMMUP00000019372.4, ENSMMUT00000020700.4
      Conserved Domains (2) summary
      cd08390
      Location:186 → 314
      C2A_Synaptotagmin-15-17; C2A domain first repeat present in Synaptotagmins 15 and 17
      cd08410
      Location:323 → 457
      C2B_Synaptotagmin-17; C2 domain second repeat present in Synaptotagmin 17

    3. XM_028841407.1 → XP_028697240.1  synaptotagmin-17 isoform X5

      UniProtKB/TrEMBL
      A0A1D5R6Q1
      Conserved Domains (2) summary
      cd08390
      Location:186 → 314
      C2A_Synaptotagmin-15-17; C2A domain first repeat present in Synaptotagmins 15 and 17
      cl14603
      Location:323 → 409
      C2; C2 domain

    4. XM_015125722.2 → XP_014981208.2  synaptotagmin-17 isoform X6

      UniProtKB/TrEMBL
      G7NPS1, H9F8M5
      Conserved Domains (2) summary
      cd08390
      Location:125 → 253
      C2A_Synaptotagmin-15-17; C2A domain first repeat present in Synaptotagmins 15 and 17
      cd08410
      Location:262 → 396
      C2B_Synaptotagmin-17; C2 domain second repeat present in Synaptotagmin 17

    5. XM_015125720.2 → XP_014981206.2  synaptotagmin-17 isoform X2

      UniProtKB/TrEMBL
      A0A1D5R6Q1
      Conserved Domains (2) summary
      cd08390
      Location:217 → 345
      C2A_Synaptotagmin-15-17; C2A domain first repeat present in Synaptotagmins 15 and 17
      cl14603
      Location:354 → 440
      C2; C2 domain

    6. XM_015125721.2 → XP_014981207.2  synaptotagmin-17 isoform X4

      UniProtKB/TrEMBL
      H9F8M5
      Conserved Domains (2) summary
      cd08390
      Location:182 → 310
      C2A_Synaptotagmin-15-17; C2A domain first repeat present in Synaptotagmins 15 and 17
      cd08410
      Location:319 → 453
      C2B_Synaptotagmin-17; C2 domain second repeat present in Synaptotagmin 17

    7. XM_015125719.2 → XP_014981205.2  synaptotagmin-17 isoform X1

      UniProtKB/TrEMBL
      H9F8M5
      Related
      ENSMMUP00000055989.2, ENSMMUT00000053682.2
      Conserved Domains (2) summary
      cd08390
      Location:217 → 345
      C2A_Synaptotagmin-15-17; C2A domain first repeat present in Synaptotagmins 15 and 17
      cd08410
      Location:354 → 488
      C2B_Synaptotagmin-17; C2 domain second repeat present in Synaptotagmin 17
    Nucleotide Protein
    Heading Accession and Version

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