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    RAD1 RAD1 checkpoint DNA exonuclease [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 698993, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RAD1provided by VGNC
    Official Full Name
    RAD1 checkpoint DNA exonucleaseprovided by VGNC
    Primary source
    VGNC:VGNC:110439
    See related
    Ensembl:ENSMMUG00000045918
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RAD1 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (34693249..34717246, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (35252396..35275969, complement)

    Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene retinoic acid induced 14 Neighboring gene uncharacterized LOC114678767 Neighboring gene tetratricopeptide repeat domain 23 like Neighboring gene DnaJ heat shock protein family (Hsp40) member C21 Neighboring gene biogenesis of ribosomes BRX1 Neighboring gene alanine--glyoxylate aminotransferase 2 Neighboring gene prolactin receptor Neighboring gene uncharacterized LOC114678768

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 3'-5' exonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA damage checkpoint signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in DNA repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of checkpoint clamp complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cell cycle checkpoint protein RAD1
    Names
    RAD1 homolog
    NP_001248089.1
    XP_014995290.1
    XP_028704963.1
    XP_028704964.1
    XP_028704965.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261160.1 → NP_001248089.1  cell cycle checkpoint protein RAD1

      See identical proteins and their annotated locations for NP_001248089.1

      Status: PROVISIONAL

      Source sequence(s)
      JU476596
      UniProtKB/TrEMBL
      F7A5K9, I0FTT8
      Related
      ENSMMUP00000045315.2, ENSMMUT00000062154.2
      Conserved Domains (1) summary
      pfam02144
      Location:17 → 257
      Rad1; Repair protein Rad1/Rec1/Rad17

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041759.1 Reference Mmul_10 Primary Assembly

      Range
      34693249..34717246 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028849130.1 → XP_028704963.1  cell cycle checkpoint protein RAD1 isoform X1

      UniProtKB/TrEMBL
      F7A5K9, I0FTT8
      Related
      ENSMMUP00000068710.1, ENSMMUT00000081402.1
      Conserved Domains (1) summary
      pfam02144
      Location:17 → 257
      Rad1; Repair protein Rad1/Rec1/Rad17

    2. XM_028849131.1 → XP_028704964.1  cell cycle checkpoint protein RAD1 isoform X2

      UniProtKB/TrEMBL
      I0FTT8
      Conserved Domains (1) summary
      pfam02144
      Location:17 → 224
      Rad1; Repair protein Rad1/Rec1/Rad17

    3. XM_015139804.2 → XP_014995290.1  cell cycle checkpoint protein RAD1 isoform X4

      Conserved Domains (1) summary
      pfam02144
      Location:17 → 222
      Rad1; Repair protein Rad1/Rec1/Rad17

    4. XM_028849132.1 → XP_028704965.1  cell cycle checkpoint protein RAD1 isoform X3

      UniProtKB/TrEMBL
      I0FTT8
      Conserved Domains (1) summary
      pfam02144
      Location:16 → 222
      Rad1; Repair protein Rad1/Rec1/Rad17
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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