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    RTEL1 regulator of telomere elongation helicase 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 719519, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RTEL1provided by VGNC
    Official Full Name
    regulator of telomere elongation helicase 1provided by VGNC
    Primary source
    VGNC:VGNC:108030
    See related
    Ensembl:ENSMMUG00000000167
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    TNFRSF6B
    Orthologs
    human mouse all
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    Genomic context

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    See RTEL1 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    36
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (98868333..98905830)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (604015..644860, complement)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene glucocorticoid modulatory element binding protein 2 Neighboring gene spidroin-1-like Neighboring gene stathmin 3 Neighboring gene TNF receptor superfamily member 6b Neighboring gene ADP ribosylation factor related protein 1 Neighboring gene zinc finger CCCH-type and G-patch domain containing

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA polymerase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA duplex unwinding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in DNA recombination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in DNA repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in DNA replication IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of DNA recombination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of t-circle formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of double-strand break repair via homologous recombination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in telomeric loop disassembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    regulator of telomere elongation helicase 1
    Names
    tumor necrosis factor receptor superfamily member 6B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      98868333..98905830
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028828729.1 → XP_028684562.1  regulator of telomere elongation helicase 1 isoform X2

      UniProtKB/TrEMBL
      F7HLS3
      Related
      ENSMMUP00000000233.4, ENSMMUT00000000246.4
      Conserved Domains (3) summary
      PRK07764
      Location:931 → 1192
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      cd13932
      Location:829 → 928
      HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
      TIGR00604
      Location:13 → 694
      rad3; DNA repair helicase (rad3)

    2. XM_028828726.1 → XP_028684559.1  regulator of telomere elongation helicase 1 isoform X1

      UniProtKB/TrEMBL
      F7HLR9
      Conserved Domains (3) summary
      PRK07764
      Location:980 → 1241
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      cd13932
      Location:878 → 977
      HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
      TIGR00604
      Location:13 → 743
      rad3; DNA repair helicase (rad3)

    3. XM_028828730.1 → XP_028684563.1  regulator of telomere elongation helicase 1 isoform X3

      UniProtKB/TrEMBL
      A0A5F7Z874, A0A5F7ZU94
      Related
      ENSMMUP00000069191.1, ENSMMUT00000100437.1
      Conserved Domains (3) summary
      PRK07764
      Location:980 → 1231
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      cd13932
      Location:878 → 977
      HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
      TIGR00604
      Location:13 → 743
      rad3; DNA repair helicase (rad3)

    4. XM_028828731.1 → XP_028684564.1  regulator of telomere elongation helicase 1 isoform X4

      UniProtKB/TrEMBL
      A0A5F7Z874
      Related
      ENSMMUP00000072139.1, ENSMMUT00000082662.1
      Conserved Domains (2) summary
      cd13932
      Location:878 → 977
      HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
      TIGR00604
      Location:13 → 743
      rad3; DNA repair helicase (rad3)

    5. XM_028828728.1 → XP_028684561.1  regulator of telomere elongation helicase 1 isoform X1

      UniProtKB/TrEMBL
      F7HLR9
      Conserved Domains (3) summary
      PRK07764
      Location:980 → 1241
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      cd13932
      Location:878 → 977
      HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
      TIGR00604
      Location:13 → 743
      rad3; DNA repair helicase (rad3)

    6. XM_028828727.1 → XP_028684560.1  regulator of telomere elongation helicase 1 isoform X1

      UniProtKB/TrEMBL
      F7HLR9
      Related
      ENSMMUP00000000235.4, ENSMMUT00000000248.4
      Conserved Domains (3) summary
      PRK07764
      Location:980 → 1241
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      cd13932
      Location:878 → 977
      HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
      TIGR00604
      Location:13 → 743
      rad3; DNA repair helicase (rad3)

    7. XM_028828734.1 → XP_028684567.1  regulator of telomere elongation helicase 1 isoform X5

      Conserved Domains (3) summary
      PRK07764
      Location:671 → 932
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      cd13932
      Location:569 → 668
      HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
      TIGR00604
      Location:143 → 434
      rad3; DNA repair helicase (rad3)

    8. XM_028828732.1 → XP_028684565.1  regulator of telomere elongation helicase 1 isoform X5

      Conserved Domains (3) summary
      PRK07764
      Location:671 → 932
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      cd13932
      Location:569 → 668
      HN_RTEL1; harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
      TIGR00604
      Location:143 → 434
      rad3; DNA repair helicase (rad3)
    Nucleotide Protein
    Heading Accession and Version

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