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    KCMF1 potassium channel modulatory factor 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 694645, updated on 17-Aug-2024

    Summary

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    Official Symbol
    KCMF1provided by VGNC
    Official Full Name
    potassium channel modulatory factor 1provided by VGNC
    Primary source
    VGNC:VGNC:73868
    See related
    Ensembl:ENSMMUG00000001414
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See KCMF1 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (23432532..23518236, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (86710155..86794537)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene transcription factor 7 like 1 Neighboring gene U6 spliceosomal RNA Neighboring gene U6 snRNA-associated Sm-like protein LSm3 pseudogene Neighboring gene uncharacterized LOC106993033 Neighboring gene thymosin beta 10 Neighboring gene TraB domain containing 2A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in synaptic signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase KCMF1
    XP_014968241.1
    XP_028688181.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      23432532..23518236 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028832348.1 → XP_028688181.1  E3 ubiquitin-protein ligase KCMF1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QDJ3, A0A5F7ZXN9, H9FXB2
      Related
      ENSMMUP00000046112.2, ENSMMUT00000058085.2
      Conserved Domains (2) summary
      cd02338
      Location:7 → 55
      ZZ_PCMF_like; Zinc finger, ZZ type. Zinc finger present in potassium channel modulatory factor (PCMF) 1 and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Human potassium channel ...
      pfam05605
      Location:76 → 137
      zf-Di19; Drought induced 19 protein (Di19), zinc-binding

    2. XM_015112755.2 → XP_014968241.1  E3 ubiquitin-protein ligase KCMF1 isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZXN9, F7CN72
      Related
      ENSMMUP00000001893.3, ENSMMUT00000002007.4
      Conserved Domains (2) summary
      cd02338
      Location:15 → 63
      ZZ_PCMF_like; Zinc finger, ZZ type. Zinc finger present in potassium channel modulatory factor (PCMF) 1 and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Human potassium channel ...
      pfam05605
      Location:84 → 145
      zf-Di19; Drought induced 19 protein (Di19), zinc-binding
    Nucleotide Protein
    Heading Accession and Version

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