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    CG6236 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41857, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG6236provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0038318
    Locus tag
    Dmel_CG6236
    See related
    AllianceGenome:FB:FBgn0038318
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG6236; gi21357449; gi23171351; gi7299997
    Summary
    Is expressed in adult head. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG6236 in Genome Data Viewer
    Location:
    88F1-88F1; 3-57 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (15325325..15328269, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (11151047..11153991, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene ENL/AF9-related Neighboring gene easter Neighboring gene mitochondrial ribosomal protein L9 Neighboring gene FK506-binding protein 39kD

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new domain family in the superfamily of alkaline phosphatases. Bhadra R, et al. In Silico Biol, 2005. PMID 16268782
    2. Laser microdissection of sensory organ precursor cells of Drosophila microchaetes. Buffin E, et al. PLoS One, 2010 Feb 19. PMID 20174573, Free PMC Article
    3. Genome-wide analysis in Drosophila reveals age-specific effects of SNPs on fitness traits. Durham MF, et al. Nat Commun, 2014 Jul 8. PMID 25000897
    4. Identification of genes that promote or inhibit olfactory memory formation in Drosophila. Walkinshaw E, et al. Genetics, 2015 Apr. PMID 25644700, Free PMC Article
    5. Seizure control through genetic and pharmacological manipulation of Pumilio in Drosophila: a key component of neuronal homeostasis. Lin WH, et al. Dis Model Mech, 2017 Feb 1. PMID 28067623, Free PMC Article

    See all (22) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG6236-PA
    CG6236-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      15325325..15328269 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_169646.3 → NP_732014.2  uncharacterized protein Dmel_CG6236, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_732014.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95TI3, Q9VF91
      Related
      FBpp0082575
      Conserved Domains (2) summary
      pfam02995
      Location:73 → 581
      DUF229; Protein of unknown function (DUF229)
      cd16021
      Location:201 → 477
      ALP_like; uncharacterized Alkaline phosphatase subfamily

    2. NM_142189.4 → NP_650446.2  uncharacterized protein Dmel_CG6236, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_650446.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95TI3, Q9VF91
      Related
      FBpp0082576
      Conserved Domains (2) summary
      pfam02995
      Location:73 → 581
      DUF229; Protein of unknown function (DUF229)
      cd16021
      Location:201 → 477
      ALP_like; uncharacterized Alkaline phosphatase subfamily
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q95TI3 Q95TI3
    Q9VF91 Q9VF91

    Gene LinkOut

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