U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    ZCRB1 zinc finger CCHC-type and RNA binding motif containing 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699318, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    ZCRB1provided by VGNC
    Official Full Name
    zinc finger CCHC-type and RNA binding motif containing 1provided by VGNC
    Primary source
    VGNC:VGNC:100124
    See related
    Ensembl:ENSMMUG00000017319
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    MADP-1
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ZCRB1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (41709079..41724946, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (40252600..40268371, complement)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene YY1 associated factor 2 Neighboring gene insulin-like growth factor 2 mRNA-binding protein 2 pseudogene Neighboring gene periphilin 1 Neighboring gene U6 spliceosomal RNA Neighboring gene FMR1 autosomal homolog 1 pseudogene

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Analysis of the Macaca mulatta transcriptome and the sequence divergence between Macaca and human. Magness CL, et al. Genome Biol, 2005. PMID 15998449, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of U12-type spliceosomal complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    zinc finger CCHC-type and RNA-binding motif-containing protein 1
    Names
    zinc finger CCHC-type and RNA binding motif 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001195521.1 → NP_001182450.1  zinc finger CCHC-type and RNA-binding motif-containing protein 1

      See identical proteins and their annotated locations for NP_001182450.1

      Status: VALIDATED

      Source sequence(s)
      CK230660, CN643233, CO648507
      UniProtKB/TrEMBL
      F7HQ87, H9EMD3
      Related
      ENSMMUP00000022790.4, ENSMMUT00000024349.4
      Conserved Domains (2) summary
      PTZ00368
      Location:97 → 123
      PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
      cd12393
      Location:9 → 84
      RRM_ZCRB1; RNA recognition motif (RRM) found in Zinc finger CCHC-type and RNA-binding motif-containing protein 1 (ZCRB1) and similar proteins

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      41709079..41724946 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015151458.2 → XP_015006944.1  zinc finger CCHC-type and RNA-binding motif-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      Q3YAN3
      Conserved Domains (2) summary
      PTZ00368
      Location:56 → 82
      PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
      cl17169
      Location:1 → 43
      RRM_SF; RNA recognition motif (RRM) superfamily
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials