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    TSNARE1 t-SNARE domain containing 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 701269, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TSNARE1provided by VGNC
    Official Full Name
    t-SNARE domain containing 1provided by VGNC
    Primary source
    VGNC:VGNC:99478
    See related
    Ensembl:ENSMMUG00000001432
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TSNARE1 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (142529214..142665436, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (141509369..141647156, complement)

    Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene dnaJ homolog subfamily C member 8 pseudogene Neighboring gene uncharacterized LOC106999972 Neighboring gene uncharacterized LOC114680365 Neighboring gene adhesion G protein-coupled receptor B1 Neighboring gene uncharacterized LOC114680364

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    t-SNARE domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041761.1 Reference Mmul_10 Primary Assembly

      Range
      142529214..142665436 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015146093.2 → XP_015001579.2  t-SNARE domain-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZQ60
      Related
      ENSMMUP00000067288.1, ENSMMUT00000087585.1
      Conserved Domains (3) summary
      pfam13873
      Location:155 → 232
      Myb_DNA-bind_5; Myb/SANT-like DNA-binding domain
      pfam14523
      Location:295 → 392
      Syntaxin_2; Syntaxin-like protein
      cl22856
      Location:443 → 483
      SNARE; SNARE motif

    2. XM_028853022.1 → XP_028708855.1  t-SNARE domain-containing protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A5F8AE89
      Related
      ENSMMUP00000076197.1, ENSMMUT00000101049.1
      Conserved Domains (3) summary
      pfam13873
      Location:105 → 182
      Myb_DNA-bind_5; Myb/SANT-like DNA-binding domain
      pfam14523
      Location:245 → 342
      Syntaxin_2; Syntaxin-like protein
      cl22856
      Location:393 → 433
      SNARE; SNARE motif

    3. XM_028853021.1 → XP_028708854.1  t-SNARE domain-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZQ60
      Conserved Domains (3) summary
      pfam13873
      Location:155 → 232
      Myb_DNA-bind_5; Myb/SANT-like DNA-binding domain
      pfam14523
      Location:295 → 392
      Syntaxin_2; Syntaxin-like protein
      cl22856
      Location:443 → 483
      SNARE; SNARE motif

    4. XM_028853020.1 → XP_028708853.1  t-SNARE domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZQ60
      Conserved Domains (3) summary
      pfam13873
      Location:171 → 248
      Myb_DNA-bind_5; Myb/SANT-like DNA-binding domain
      pfam14523
      Location:311 → 408
      Syntaxin_2; Syntaxin-like protein
      cl22856
      Location:459 → 499
      SNARE; SNARE motif
    Nucleotide Protein
    Heading Accession and Version

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