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    HPSE heparanase [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 707583, updated on 17-Aug-2024

    Summary

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    Official Symbol
    HPSEprovided by VGNC
    Official Full Name
    heparanaseprovided by VGNC
    Primary source
    VGNC:VGNC:73516
    See related
    Ensembl:ENSMMUG00000013342
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See HPSE in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (50324343..50367774)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (50980407..51023873)

    Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106998327 Neighboring gene ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)-like Neighboring gene coenzyme Q2, polyprenyltransferase Neighboring gene aminomethyltransferase, mitochondrial pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hydrolase activity, acting on glycosyl bonds IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular matrix IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    heparanase
    XP_001104975.2
    XP_014993874.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041758.1 Reference Mmul_10 Primary Assembly

      Range
      50324343..50367774
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001104975.4 → XP_001104975.2  heparanase isoform X1

      UniProtKB/TrEMBL
      F6XCE6, G8F179
      Related
      ENSMMUP00000017538.4, ENSMMUT00000018725.4
      Conserved Domains (1) summary
      pfam03662
      Location:173 → 372
      Glyco_hydro_79n; Glycosyl hydrolase family 79, N-terminal domain

    2. XM_015138388.2 → XP_014993874.2  heparanase isoform X2

      UniProtKB/TrEMBL
      G8F179
      Conserved Domains (1) summary
      pfam03662
      Location:111 → 310
      Glyco_hydro_79n; Glycosyl hydrolase family 79, N-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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