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    SLC52A3 solute carrier family 52 member 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 715057, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SLC52A3provided by VGNC
    Official Full Name
    solute carrier family 52 member 3provided by VGNC
    Primary source
    VGNC:VGNC:77717
    Locus tag
    EGK_02565
    See related
    Ensembl:ENSMMUG00000021670
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    C20orf54
    Orthologs
    human mouse all
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    Genomic context

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    See SLC52A3 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (65775491..65790948)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (33532800..33548245, complement)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene angiopoietin 4 Neighboring gene family with sequence similarity 110 member A Neighboring gene uncharacterized LOC114670457 Neighboring gene uncharacterized LOC114670458 Neighboring gene scratch family transcriptional repressor 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables riboflavin transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in riboflavin transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    solute carrier family 52, riboflavin transporter, member 3
    Names
    riboflavin transporter 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001194561.2 → NP_001181490.1  solute carrier family 52, riboflavin transporter, member 3

      See identical proteins and their annotated locations for NP_001181490.1

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000030
      UniProtKB/TrEMBL
      A0A8J8XDI6, F7F4Y5, G7N2Q0
      Related
      ENSMMUP00000028536.2, ENSMMUT00000030494.4
      Conserved Domains (1) summary
      pfam06237
      Location:298 → 395
      DUF1011; Protein of unknown function (DUF1011)

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      65775491..65790948
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015149298.2 → XP_015004784.1  solute carrier family 52, riboflavin transporter, member 3 isoform X1

      UniProtKB/TrEMBL
      A0A8J8XDI6, F7F4Y5, G7N2Q0
      Conserved Domains (1) summary
      pfam06237
      Location:298 → 395
      DUF1011; Protein of unknown function (DUF1011)

    2. XM_015149297.2 → XP_015004783.1  solute carrier family 52, riboflavin transporter, member 3 isoform X1

      UniProtKB/TrEMBL
      A0A8J8XDI6, F7F4Y5, G7N2Q0
      Related
      ENSMMUP00000067123.1, ENSMMUT00000102603.1
      Conserved Domains (1) summary
      pfam06237
      Location:298 → 395
      DUF1011; Protein of unknown function (DUF1011)

    3. XM_015149299.2 → XP_015004785.1  solute carrier family 52, riboflavin transporter, member 3 isoform X1

      UniProtKB/TrEMBL
      A0A8J8XDI6, F7F4Y5, G7N2Q0
      Conserved Domains (1) summary
      pfam06237
      Location:298 → 395
      DUF1011; Protein of unknown function (DUF1011)
    Nucleotide Protein
    Heading Accession and Version

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