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    PRICKLE2 prickle planar cell polarity protein 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 701254, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PRICKLE2provided by VGNC
    Official Full Name
    prickle planar cell polarity protein 2provided by VGNC
    Primary source
    VGNC:VGNC:76294
    Locus tag
    EGK_11511
    See related
    Ensembl:ENSMMUG00000001513
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PRICKLE2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (120234894..120587380, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (77626675..77979250)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U3 Neighboring gene proteasome 26S subunit, non-ATPase 6 Neighboring gene thioredoxin-dependent peroxide reductase, mitochondrial-like Neighboring gene U6 spliceosomal RNA Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 9 Neighboring gene uncharacterized LOC106996879

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    prickle-like protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001260650.1 → NP_001247579.1  prickle-like protein 2

      See identical proteins and their annotated locations for NP_001247579.1

      Status: PROVISIONAL

      Source sequence(s)
      JU333205
      UniProtKB/TrEMBL
      A0A1D5QD14, A0A8J8XED2, F7GCX1, G7MKY2
      Related
      ENSMMUP00000002011.4, ENSMMUT00000002129.4
      Conserved Domains (4) summary
      cd09415
      Location:130 → 188
      LIM1_Prickle; The first LIM domain of Prickle
      cd09418
      Location:193 → 248
      LIM2_Prickle; The second LIM domain of Prickle
      cd09420
      Location:253 → 311
      LIM3_Prickle; The third LIM domain of Prickle
      cd09827
      Location:26 → 122
      PET_Prickle; The PET domain of Prickle

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      120234894..120587380 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015130445.2 → XP_014985931.1  prickle-like protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QIH0
      Conserved Domains (4) summary
      cd09415
      Location:186 → 244
      LIM1_Prickle; The first LIM domain of Prickle
      cd09418
      Location:249 → 304
      LIM2_Prickle; The second LIM domain of Prickle
      cd09420
      Location:309 → 367
      LIM3_Prickle; The third LIM domain of Prickle
      cd09827
      Location:82 → 178
      PET_Prickle; The PET domain of Prickle

    2. XM_015130446.2 → XP_014985932.1  prickle-like protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QD14, A0A8J8XED2, F7GCX1, G7MKY2
      Conserved Domains (4) summary
      cd09415
      Location:130 → 188
      LIM1_Prickle; The first LIM domain of Prickle
      cd09418
      Location:193 → 248
      LIM2_Prickle; The second LIM domain of Prickle
      cd09420
      Location:253 → 311
      LIM3_Prickle; The third LIM domain of Prickle
      cd09827
      Location:26 → 122
      PET_Prickle; The PET domain of Prickle
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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