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    SPG21 SPG21 abhydrolase domain containing, maspardin [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 712815, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SPG21provided by VGNC
    Official Full Name
    SPG21 abhydrolase domain containing, maspardinprovided by VGNC
    Primary source
    VGNC:VGNC:77970
    See related
    Ensembl:ENSMMUG00000010949
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SPG21 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (41495380..41523700, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (41623389..41651655, complement)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene pleckstrin homology domain containing O2 Neighboring gene ankyrin repeat and death domain containing 1A Neighboring gene mitochondrial methionyl-tRNA formyltransferase Neighboring gene transmembrane protein 126A pseudogene Neighboring gene SLC51 subunit beta Neighboring gene RAS like family 12

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables CD4 receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in trans-Golgi network transport vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    maspardin
    Names
    SPG21, maspardin
    spastic paraplegia 21 (autosomal recessive, Mast syndrome)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001194890.2 → NP_001181819.1  maspardin

      See identical proteins and their annotated locations for NP_001181819.1

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000411
      UniProtKB/TrEMBL
      G7MXU0

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      41495380..41523700 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015142466.2 → XP_014997952.2  maspardin isoform X1

      UniProtKB/TrEMBL
      A0A5F8AC91
      Related
      ENSMMUP00000074992.1, ENSMMUT00000088940.1
      Conserved Domains (3) summary
      TIGR01250
      Location:281 → 461
      pro_imino_pep_2; proline-specific peptidase, Bacillus coagulans-type subfamily
      PHA03247
      Location:70 → 195
      PHA03247; large tegument protein UL36; Provisional
      pfam00561
      Location:247 → 367
      Abhydrolase_1; alpha/beta hydrolase fold

    2. XM_001101919.4 → XP_001101919.2  maspardin isoform X3

      See identical proteins and their annotated locations for XP_001101919.2

      UniProtKB/TrEMBL
      A0A1D5QGQ8, A0A1D5QIQ0, F7GGK1, G7MXU0
      Related
      ENSMMUP00000014361.4, ENSMMUT00000015323.4
      Conserved Domains (2) summary
      pfam12697
      Location:46 → 266
      Abhydrolase_6; Alpha/beta hydrolase family
      cl21494
      Location:45 → 147
      Abhydrolase; alpha/beta hydrolases

    3. XM_015142467.2 → XP_014997953.1  maspardin isoform X3

      UniProtKB/TrEMBL
      A0A1D5QGQ8, A0A1D5QIQ0, F7GGK1, G7MXU0
      Related
      ENSMMUP00000047922.2, ENSMMUT00000063349.2
      Conserved Domains (2) summary
      pfam12697
      Location:46 → 266
      Abhydrolase_6; Alpha/beta hydrolase family
      cl21494
      Location:45 → 147
      Abhydrolase; alpha/beta hydrolases

    4. XM_028850455.1 → XP_028706288.1  maspardin isoform X2

      UniProtKB/TrEMBL
      A0A5F8AA00
      Related
      ENSMMUP00000074768.1, ENSMMUT00000096125.1
      Conserved Domains (2) summary
      PHA03247
      Location:70 → 195
      PHA03247; large tegument protein UL36; Provisional
      pfam00561
      Location:261 → 340
      Abhydrolase_1; alpha/beta hydrolase fold
    Nucleotide Protein
    Heading Accession and Version

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