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    CHSY3 chondroitin sulfate synthase 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 705715, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CHSY3provided by VGNC
    Official Full Name
    chondroitin sulfate synthase 3provided by VGNC
    Primary source
    VGNC:VGNC:71089
    See related
    Ensembl:ENSMMUG00000003312
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CHSY3 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (127367069..127653901)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (127521507..127809763)

    Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114678899 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 19 Neighboring gene membrane integral NOTCH2 associated receptor 2 Neighboring gene heat shock cognate 71 kDa protein pseudogene Neighboring gene U7 small nuclear RNA Neighboring gene ADP-ribosylation factor-like protein 2-binding protein pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chondroitin sulfate biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi cisterna membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    chondroitin sulfate synthase 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041759.1 Reference Mmul_10 Primary Assembly

      Range
      127367069..127653901
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001099447.4 → XP_001099447.4  chondroitin sulfate synthase 3

      UniProtKB/TrEMBL
      F7EL39
      Related
      ENSMMUP00000004416.4, ENSMMUT00000004683.4
      Conserved Domains (3) summary
      pfam16214
      Location:45 → 167
      AC_N; Adenylyl cyclase N-terminal extracellular and transmembrane region
      pfam05679
      Location:328 → 864
      CHGN; Chondroitin N-acetylgalactosaminyltransferase
      cl21608
      Location:173 → 398
      Galactosyl_T; Galactosyltransferase
    Nucleotide Protein
    Heading Accession and Version

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