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    TFDP3 transcription factor Dp family member 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 706557, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TFDP3provided by VGNC
    Official Full Name
    transcription factor Dp family member 3provided by VGNC
    Primary source
    VGNC:VGNC:79443
    Locus tag
    EGK_20944
    See related
    Ensembl:ENSMMUG00000017335
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human all
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    Genomic context

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    See TFDP3 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) X NC_041774.1 (129477053..129478768, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) X NC_027913.1 (127177823..127179504, complement)

    Chromosome X - NC_041774.1Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 26 Neighboring gene small nucleolar RNA SNORA8 Neighboring gene U1 spliceosomal RNA Neighboring gene glypican 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor Dp family member 3
    Names
    Hepatocellular carcinoma-associated antigen 661

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041774.1 Reference Mmul_10 Primary Assembly

      Range
      129477053..129478768 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001097146.4 → XP_001097146.1  transcription factor Dp family member 3

      See identical proteins and their annotated locations for XP_001097146.1

      UniProtKB/TrEMBL
      A0A663D897, A0A8J8XSQ2, F7HDM2, G7NRL4
      Related
      ENSMMUP00000022809.3, ENSMMUT00000024370.4
      Conserved Domains (3) summary
      cd14458
      Location:193 → 239
      DP_DD; coiled coil [structural motif]
      pfam02319
      Location:108 → 188
      E2F_TDP; E2F/DP family winged-helix DNA-binding domain
      pfam08781
      Location:195 → 334
      DP; Transcription factor DP
    Nucleotide Protein
    Heading Accession and Version

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    Research Materials