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    CDC16 cell division cycle 16 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699089, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CDC16provided by VGNC
    Official Full Name
    cell division cycle 16provided by VGNC
    Primary source
    VGNC:VGNC:70792
    See related
    Ensembl:ENSMMUG00000007439
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CDC16 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 17 NC_041770.1 (95300874..95341012)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 17 NC_027909.1 (95557150..95597453)

    Chromosome 17 - NC_041770.1Genomic Context describing neighboring genes Neighboring gene chromosome 17 C13orf46 homolog Neighboring gene RAS p21 protein activator 3 Neighboring gene uncharacterized LOC106994408 Neighboring gene UPF3A regulator of nonsense mediated mRNA decay Neighboring gene chromosome alignment maintaining phosphoprotein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell division IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cell division cycle protein 16 homolog
    Names
    cell division cycle 16 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266466.1 → NP_001253395.1  cell division cycle protein 16 homolog

      See identical proteins and their annotated locations for NP_001253395.1

      Status: PROVISIONAL

      Source sequence(s)
      JU477671
      UniProtKB/TrEMBL
      F6SWK5, G7NJP6
      Related
      ENSMMUP00000035986.1, ENSMMUT00000042973.3
      Conserved Domains (5) summary
      COG3063
      Location:371 → 511
      PilF; Tfp pilus assembly protein PilF [Cell motility, Extracellular structures]
      TIGR02917
      Location:134 → 502
      PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
      sd00006
      Location:402 → 430
      TPR; TPR repeat [structural motif]
      pfam13424
      Location:447 → 511
      TPR_12; Tetratricopeptide repeat
      pfam12895
      Location:15 → 94
      ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041770.1 Reference Mmul_10 Primary Assembly

      Range
      95300874..95341012
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015121537.2 → XP_014977023.1  cell division cycle protein 16 homolog isoform X1

      UniProtKB/TrEMBL
      F6SWK5, G7NJP6
      Conserved Domains (5) summary
      COG3063
      Location:371 → 511
      PilF; Tfp pilus assembly protein PilF [Cell motility, Extracellular structures]
      TIGR02917
      Location:134 → 502
      PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
      sd00006
      Location:402 → 430
      TPR; TPR repeat [structural motif]
      pfam13424
      Location:447 → 511
      TPR_12; Tetratricopeptide repeat
      pfam12895
      Location:15 → 94
      ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3

    2. XM_015121538.2 → XP_014977024.1  cell division cycle protein 16 homolog isoform X3

      UniProtKB/TrEMBL
      G7NJP6
      Conserved Domains (5) summary
      COG3063
      Location:371 → 511
      PilF; Tfp pilus assembly protein PilF [Cell motility, Extracellular structures]
      TIGR02917
      Location:134 → 502
      PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
      sd00006
      Location:447 → 473
      TPR; TPR repeat [structural motif]
      pfam13424
      Location:447 → 511
      TPR_12; Tetratricopeptide repeat
      pfam12895
      Location:15 → 94
      ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3

    3. XM_028837110.1 → XP_028692943.1  cell division cycle protein 16 homolog isoform X2

      UniProtKB/TrEMBL
      F6SWL5, G7NJP6
      Conserved Domains (5) summary
      COG3063
      Location:358 → 498
      PilF; Tfp pilus assembly protein PilF [Cell motility, Extracellular structures]
      TIGR02917
      Location:10 → 489
      PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
      sd00006
      Location:389 → 417
      TPR; TPR repeat [structural motif]
      pfam13424
      Location:434 → 498
      TPR_12; Tetratricopeptide repeat
      pfam12895
      Location:15 → 81
      ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3

    4. XM_028837111.1 → XP_028692944.1  cell division cycle protein 16 homolog isoform X2

      UniProtKB/TrEMBL
      F6SWL5, G7NJP6
      Related
      ENSMMUP00000009766.4, ENSMMUT00000010405.4
      Conserved Domains (5) summary
      COG3063
      Location:358 → 498
      PilF; Tfp pilus assembly protein PilF [Cell motility, Extracellular structures]
      TIGR02917
      Location:10 → 489
      PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
      sd00006
      Location:389 → 417
      TPR; TPR repeat [structural motif]
      pfam13424
      Location:434 → 498
      TPR_12; Tetratricopeptide repeat
      pfam12895
      Location:15 → 81
      ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3

    5. XM_015121540.2 → XP_014977026.1  cell division cycle protein 16 homolog isoform X4

      UniProtKB/TrEMBL
      G7NJP6
      Conserved Domains (4) summary
      COG3063
      Location:277 → 417
      PilF; Tfp pilus assembly protein PilF [Cell motility, Extracellular structures]
      TIGR02917
      Location:40 → 408
      PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
      sd00006
      Location:308 → 336
      TPR; TPR repeat [structural motif]
      pfam13424
      Location:353 → 417
      TPR_12; Tetratricopeptide repeat
    Nucleotide Protein
    Heading Accession and Version

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