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    LOC713490 RNA-binding protein 4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 713490, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC713490
    Gene description
    RNA-binding protein 4
    Locus tag
    EGK_05956
    See related
    Ensembl:ENSMMUG00000020363
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    RBM4
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    Genomic context

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    See LOC713490 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (7882618..7937051, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (7753893..7809638, complement)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene TOP6B like initiator of meiotic double strand breaks Neighboring gene complement component 1 Q subcomponent-binding protein, mitochondrial pseudogene Neighboring gene spectrin beta, non-erythrocytic 2 Neighboring gene RNA-binding protein 4B Neighboring gene RNA-binding protein 14 Neighboring gene U4 spliceosomal RNA Neighboring gene copper chaperone for superoxide dismutase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nuclear speck IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RNA-binding protein 4
    Names
    RNA-binding motif protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      7882618..7937051 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015113624.2 → XP_014969110.1  RNA-binding protein 4 isoform X3

      Conserved Domains (2) summary
      cd12606
      Location:2 → 68
      RRM1_RBM4; RNA recognition motif 1 in vertebrate RNA-binding protein 4 (RBM4)
      cl17169
      Location:78 → 143
      RRM_SF; RNA recognition motif (RRM) superfamily

    2. XM_015113621.2 → XP_014969107.1  RNA-binding protein 4 isoform X1

      UniProtKB/TrEMBL
      H9G0H8
      Conserved Domains (4) summary
      PTZ00368
      Location:156 → 192
      PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
      smart00343
      Location:172 → 187
      ZnF_C2HC; zinc finger
      cd12606
      Location:13 → 79
      RRM1_RBM4; RNA recognition motif 1 in vertebrate RNA-binding protein 4 (RBM4)
      cd12607
      Location:89 → 155
      RRM2_RBM4; RNA recognition motif 2 in vertebrate RNA-binding protein 4 (RBM4)

    3. XM_015113625.2 → XP_014969111.1  RNA-binding protein 4 isoform X4

      UniProtKB/TrEMBL
      F6W8J1
      Conserved Domains (1) summary
      cl17169
      Location:78 → 138
      RRM_SF; RNA recognition motif (RRM) superfamily

    4. XM_015113622.1 → XP_014969108.1  RNA-binding protein 4 isoform X2

      UniProtKB/TrEMBL
      A0A1D5Q5S0, A0A8J8XR32, F6W8L6, F7CXZ1, G7NC46, H9G0H8
      Related
      ENSMMUP00000037607.1, ENSMMUT00000044583.3
      Conserved Domains (4) summary
      PTZ00368
      Location:145 → 181
      PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
      smart00343
      Location:161 → 176
      ZnF_C2HC; zinc finger
      cd12606
      Location:2 → 68
      RRM1_RBM4; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding protein 4 (RBM4)
      cd12607
      Location:78 → 144
      RRM2_RBM4; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding protein 4 (RBM4)

    5. XM_015113626.2 → XP_014969112.1  RNA-binding protein 4 isoform X4

      UniProtKB/TrEMBL
      F6W8J1
      Conserved Domains (1) summary
      cl17169
      Location:78 → 138
      RRM_SF; RNA recognition motif (RRM) superfamily

    6. XM_015113623.2 → XP_014969109.1  RNA-binding protein 4 isoform X2

      UniProtKB/TrEMBL
      A0A1D5Q5S0, A0A8J8XR32, F6W8L6, F7CXZ1, G7NC46, H9G0H8
      Related
      ENSMMUP00000043386.2, ENSMMUT00000062699.2
      Conserved Domains (4) summary
      PTZ00368
      Location:145 → 181
      PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
      smart00343
      Location:161 → 176
      ZnF_C2HC; zinc finger
      cd12606
      Location:2 → 68
      RRM1_RBM4; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding protein 4 (RBM4)
      cd12607
      Location:78 → 144
      RRM2_RBM4; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding protein 4 (RBM4)

    RNA

    1. XR_001439352.2 RNA Sequence

      Related
      ENSMMUT00000102889.1

    2. XR_001439351.2 RNA Sequence

    3. XR_003722458.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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