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    RAD9B RAD9 checkpoint clamp component B [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 711050, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RAD9Bprovided by VGNC
    Official Full Name
    RAD9 checkpoint clamp component Bprovided by VGNC
    Primary source
    VGNC:VGNC:76517
    Locus tag
    EGK_04182
    See related
    Ensembl:ENSMMUG00000013155
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RAD9B in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (110154052..110191652)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (110488359..110524627)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene GPN-loop GTPase 3 Neighboring gene family with sequence similarity 216 member A Neighboring gene small nucleolar RNA SNORD50 Neighboring gene peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 pseudogene Neighboring gene VPS29 retromer complex component Neighboring gene protein phosphatase targeting COQ7 Neighboring gene tectonic family member 1 Neighboring gene uncharacterized LOC114670948 Neighboring gene hydrogen voltage gated channel 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in DNA repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in DNA replication checkpoint signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to ionizing radiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic intra-S DNA damage checkpoint signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of checkpoint clamp complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cell cycle checkpoint control protein RAD9B
    Names
    RAD9 homolog B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      110154052..110191652
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028829862.1 → XP_028685695.1  cell cycle checkpoint control protein RAD9B isoform X5

      Conserved Domains (1) summary
      pfam04139
      Location:1 → 79
      Rad9

    2. XM_015152778.2 → XP_015008264.1  cell cycle checkpoint control protein RAD9B isoform X4

      UniProtKB/TrEMBL
      F6Z835
      Conserved Domains (1) summary
      pfam04139
      Location:5 → 204
      Rad9

    3. XM_001099777.4 → XP_001099777.2  cell cycle checkpoint control protein RAD9B isoform X2

      See identical proteins and their annotated locations for XP_001099777.2

      UniProtKB/TrEMBL
      F6Z843, G7N5G9
      Related
      ENSMMUP00000017282.4, ENSMMUT00000018456.4
      Conserved Domains (2) summary
      cd00577
      Location:6 → 275
      PCNA; Proliferating Cell Nuclear Antigen (PCNA) domain found in eukaryotes and archaea. These polymerase processivity factors play a role in DNA replication and repair. PCNA encircles duplex DNA in its central cavity, providing a DNA-bound platform for the ...
      pfam04139
      Location:14 → 273
      Rad9; Rad9

    4. XM_028829863.1 → XP_028685696.1  cell cycle checkpoint control protein RAD9B isoform X6

      UniProtKB/TrEMBL
      F6Z843
      Conserved Domains (1) summary
      pfam04139
      Location:14 → 273
      Rad9

    5. XM_028829861.1 → XP_028685694.1  cell cycle checkpoint control protein RAD9B isoform X5

      Conserved Domains (1) summary
      pfam04139
      Location:1 → 79
      Rad9

    6. XM_015152777.2 → XP_015008263.1  cell cycle checkpoint control protein RAD9B isoform X4

      UniProtKB/TrEMBL
      F6Z835
      Conserved Domains (1) summary
      pfam04139
      Location:5 → 204
      Rad9

    7. XM_015152774.2 → XP_015008260.1  cell cycle checkpoint control protein RAD9B isoform X1

      UniProtKB/TrEMBL
      F6Z843
      Conserved Domains (1) summary
      pfam04139
      Location:22 → 281
      Rad9

    8. XM_028829858.1 → XP_028685691.1  cell cycle checkpoint control protein RAD9B isoform X1

      UniProtKB/TrEMBL
      F6Z843
      Conserved Domains (1) summary
      pfam04139
      Location:22 → 281
      Rad9

    9. XM_028829860.1 → XP_028685693.1  cell cycle checkpoint control protein RAD9B isoform X5

      Conserved Domains (1) summary
      pfam04139
      Location:1 → 79
      Rad9

    10. XM_028829859.1 → XP_028685692.1  cell cycle checkpoint control protein RAD9B isoform X3

      UniProtKB/TrEMBL
      F6Z843
      Conserved Domains (1) summary
      pfam04139
      Location:22 → 281
      Rad9
    Nucleotide Protein
    Heading Accession and Version

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