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    BPIFB1 BPI fold containing family B member 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 710014, updated on 17-Aug-2024

    Summary

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    Official Symbol
    BPIFB1provided by VGNC
    Official Full Name
    BPI fold containing family B member 1provided by VGNC
    Primary source
    VGNC:VGNC:107774
    See related
    Ensembl:ENSMMUG00000062078
    Gene type
    protein coding
    RefSeq status
    INFERRED
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See BPIFB1 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (68475778..68511596)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (30852847..30880118, complement)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107000429 Neighboring gene BPI fold containing family A member 1 Neighboring gene uncharacterized LOC114670468 Neighboring gene CDK5 regulatory subunit associated protein 1 Neighboring gene syntrophin alpha 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Distant cousins: genomic and sequence diversity within the BPI fold-containing (BPIF)/PLUNC protein family. Bingle CD, et al. Biochem Soc Trans, 2011 Aug. PMID 21787330
    2. Systematic nomenclature for the PLUNC/PSP/BSP30/SMGB proteins as a subfamily of the BPI fold-containing superfamily. Bingle CD, et al. Biochem Soc Trans, 2011 Aug. PMID 21787333, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables lipid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    BPI fold-containing family B member 1
    Names
    long palate, lung and nasal epithelium carcinoma-associated protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001243257.3 → NP_001230186.2  BPI fold-containing family B member 1 precursor

      Status: INFERRED

      Source sequence(s)
      AC196589, QNVO02000030
      UniProtKB/TrEMBL
      A0A5F7ZBS5, A0A5F8A3P0
      Related
      ENSMMUP00000062625.1, ENSMMUT00000091923.1
      Conserved Domains (2) summary
      cd00025
      Location:26 → 262
      BPI1; BPI/LBP/CETP N-terminal domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) N-terminal domain; binds to and neutralizes lipopolysaccharides from the outer ...
      cd00026
      Location:279 → 474
      BPI2; BPI/LBP/CETP C-terminal domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) C-terminal domain; binds to and neutralizes lipopolysaccharides from the outer ...

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      68475778..68511596
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028827326.1 → XP_028683159.1  BPI fold-containing family B member 1 isoform X1

      UniProtKB/TrEMBL
      A0A5F8A3P0, A0A5F8A3R2
      Related
      ENSMMUP00000072573.1, ENSMMUT00000079914.1
      Conserved Domains (2) summary
      cd00025
      Location:73 → 309
      BPI1; BPI/LBP/CETP N-terminal domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) N-terminal domain; binds to and neutralizes lipopolysaccharides from the outer ...
      cd00026
      Location:326 → 521
      BPI2; BPI/LBP/CETP C-terminal domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) C-terminal domain; binds to and neutralizes lipopolysaccharides from the outer ...

    2. XM_015149070.2 → XP_015004556.2  BPI fold-containing family B member 1 isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZBS5, A0A5F8A3P0
      Related
      ENSMMUP00000071973.1, ENSMMUT00000095366.1
      Conserved Domains (2) summary
      cd00025
      Location:26 → 262
      BPI1; BPI/LBP/CETP N-terminal domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) N-terminal domain; binds to and neutralizes lipopolysaccharides from the outer ...
      cd00026
      Location:279 → 474
      BPI2; BPI/LBP/CETP C-terminal domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) C-terminal domain; binds to and neutralizes lipopolysaccharides from the outer ...
    Nucleotide Protein
    Heading Accession and Version

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