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    STOX2 storkhead box 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 693692, updated on 17-Aug-2024

    Summary

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    Official Symbol
    STOX2provided by VGNC
    Official Full Name
    storkhead box 2provided by VGNC
    Primary source
    VGNC:VGNC:78210
    See related
    Ensembl:ENSMMUG00000004898
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See STOX2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (181226059..181343551)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (184330322..184449467)

    Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene trafficking protein particle complex subunit 11 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC106998602 Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase 6 Neighboring gene uncharacterized LOC106998595

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    storkhead-box protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266165.1 → NP_001253094.1  storkhead-box protein 2

      See identical proteins and their annotated locations for NP_001253094.1

      Status: PROVISIONAL

      Source sequence(s)
      JU335546
      UniProtKB/TrEMBL
      F7CJI1, H9FXE0
      Related
      ENSMMUP00000006507.4, ENSMMUT00000006918.4
      Conserved Domains (1) summary
      pfam10264
      Location:64 → 140
      Stork_head; Winged helix Storkhead-box1 domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041758.1 Reference Mmul_10 Primary Assembly

      Range
      181226059..181343551
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015139557.2 → XP_014995043.2  storkhead-box protein 2 isoform X4

      UniProtKB/TrEMBL
      F7CJI1
      Conserved Domains (1) summary
      pfam10264
      Location:64 → 140
      Stork_head; Winged helix Storkhead-box1 domain

    2. XM_028847945.1 → XP_028703778.1  storkhead-box protein 2 isoform X1

      UniProtKB/TrEMBL
      G7MSD6
      Conserved Domains (1) summary
      pfam10264
      Location:26 → 102
      Stork_head; Winged helix Storkhead-box1 domain

    3. XM_028847947.1 → XP_028703780.1  storkhead-box protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QIT1, G7MSD6
      Related
      ENSMMUP00000047953.2, ENSMMUT00000065836.2
      Conserved Domains (1) summary
      pfam10264
      Location:17 → 93
      Stork_head; Winged helix Storkhead-box1 domain

    4. XM_028847946.1 → XP_028703779.1  storkhead-box protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QIT1, G7MSD6
      Conserved Domains (1) summary
      pfam10264
      Location:17 → 93
      Stork_head; Winged helix Storkhead-box1 domain

    5. XM_028847948.1 → XP_028703781.1  storkhead-box protein 2 isoform X3

      UniProtKB/TrEMBL
      G7MSD6
      Conserved Domains (1) summary
      pfam10264
      Location:2 → 78
      Stork_head; Winged helix Storkhead-box1 domain

    6. XM_015139556.2 → XP_014995042.2  storkhead-box protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QIT1, G7MSD6
      Related
      ENSMMUP00000066541.1, ENSMMUT00000101861.1
      Conserved Domains (1) summary
      pfam10264
      Location:17 → 93
      Stork_head; Winged helix Storkhead-box1 domain
    Nucleotide Protein
    Heading Accession and Version

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