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    NXF1 nuclear RNA export factor 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 718420, updated on 17-Aug-2024

    Summary

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    Official Symbol
    NXF1provided by VGNC
    Official Full Name
    nuclear RNA export factor 1provided by VGNC
    Primary source
    VGNC:VGNC:75565
    See related
    Ensembl:ENSMMUG00000000188
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See NXF1 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (11388631..11403715)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (11498992..11513750)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L9 pseudogene Neighboring gene WD repeat domain 74 Neighboring gene syntaxin 5 Neighboring gene U6 spliceosomal RNA Neighboring gene transmembrane protein 223 Neighboring gene transmembrane protein 179B Neighboring gene translation machinery-associated protein 7 pseudogene Neighboring gene TATA-box binding protein associated factor 6 like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in poly(A)+ mRNA export from nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nuclear RNA export factor 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      11388631..11403715
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015113956.2 → XP_014969442.1  nuclear RNA export factor 1

      UniProtKB/TrEMBL
      A0A1D5QS92, F7HJI6, H9YW98
      Related
      ENSMMUP00000000265.4, ENSMMUT00000000280.4
      Conserved Domains (6) summary
      smart00804
      Location:556 → 618
      TAP_C; C-terminal domain of vertebrate Tap protein
      COG4886
      Location:200 → 327
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      cd00780
      Location:382 → 538
      NTF2; Nuclear transport factor 2 (NTF2) domain plays an important role in the trafficking of macromolecules, ions and small molecules between the cytoplasm and nucleus. This bi-directional transport of macromolecules across the nuclear envelope requires many ...
      sd00035
      Location:224 → 266
      LRR_NTF; leucine-rich repeat [structural motif]
      pfam09162
      Location:116 → 198
      Tap-RNA_bind; Tap, RNA-binding
      pfam13855
      Location:265 → 327
      LRR_8; Leucine rich repeat
    Nucleotide Protein
    Heading Accession and Version

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