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    COPS2 COP9 signalosome subunit 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714814, updated on 17-Aug-2024

    Summary

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    Official Symbol
    COPS2provided by VGNC
    Official Full Name
    COP9 signalosome subunit 2provided by VGNC
    Primary source
    VGNC:VGNC:71376
    See related
    Ensembl:ENSMMUG00000009838
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See COPS2 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (25540858..25572481, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (25431455..25463060, complement)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene keratin, type II cytoskeletal 8-like Neighboring gene SECIS binding protein 2 like Neighboring gene uncharacterized LOC114679398 Neighboring gene NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4 pseudogene Neighboring gene galactokinase 2 Neighboring gene microRNA mir-4716

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein deneddylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of COP9 signalosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    COP9 signalosome complex subunit 2
    Names
    COP9 constitutive photomorphogenic homolog subunit 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001193601.2 → NP_001180530.1  COP9 signalosome complex subunit 2

      See identical proteins and their annotated locations for NP_001180530.1

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000411
      UniProtKB/TrEMBL
      G7MX97, H9G1W2
      Related
      ENSMMUP00000052298.2, ENSMMUT00000078756.2
      Conserved Domains (2) summary
      COG5159
      Location:40 → 434
      RPN6; 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]
      pfam01399
      Location:309 → 413
      PCI; PCI domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      25540858..25572481 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015142200.2 → XP_014997686.1  COP9 signalosome complex subunit 2 isoform X1

      UniProtKB/TrEMBL
      G7MX97, H9G1W4
      Conserved Domains (2) summary
      COG5159
      Location:40 → 441
      RPN6; 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]
      pfam01399
      Location:316 → 420
      PCI; PCI domain
    Nucleotide Protein
    Heading Accession and Version

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