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    DEFB121 defensin beta 121 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 619507, updated on 17-Aug-2024

    Summary

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    Official Symbol
    DEFB121provided by VGNC
    Official Full Name
    defensin beta 121provided by VGNC
    Primary source
    VGNC:VGNC:82080
    Locus tag
    EGK_02543
    See related
    Ensembl:ENSMMUG00000017530
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human all
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    Genomic context

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    See DEFB121 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (66659131..66667113, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (32657707..32665872)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA40 Neighboring gene defensin beta 119 Neighboring gene beta defensin 122 Neighboring gene regulator of nonsense transcripts 3B pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification, characterization, and evolution of a primate beta-defensin gene cluster. Radhakrishnan Y, et al. Genes Immun, 2005 May. PMID 15772680, Free PMC Article
    2. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in innate immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    beta-defensin 121

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001034197.1 → NP_001029369.1  beta-defensin 121 precursor

      See identical proteins and their annotated locations for NP_001029369.1

      Status: PROVISIONAL

      Source sequence(s)
      AY499408
      UniProtKB/Swiss-Prot
      Q5J600
      UniProtKB/TrEMBL
      F7CK77, G7N560
      Related
      ENSMMUP00000037672.3, ENSMMUT00000044649.3
      Conserved Domains (1) summary
      pfam13841
      Location:22 → 51
      Defensin_beta_2; Beta defensin

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      66659131..66667113 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015149225.2 → XP_015004711.2  beta-defensin 121 isoform X1

      UniProtKB/TrEMBL
      F7CK77
      Conserved Domains (1) summary
      pfam13841
      Location:10 → 39
      Defensin_beta_2; Beta defensin
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5J600.1 GenPept UniProtKB/Swiss-Prot:Q5J600

    Gene LinkOut

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