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    CG1971 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43755, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG1971provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039881
    Locus tag
    Dmel_CG1971
    See related
    AllianceGenome:FB:FBgn0039881
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG1971
    Summary
    Is expressed in organism. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG1971 in Genome Data Viewer
    Location:
    100D2-100D2; 3-102 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (31805468..31806769)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (27631190..27632491)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene ATP-dependent chromatin assembly factor large subunit Neighboring gene uncharacterized protein Neighboring gene Ionotropic receptor 100a Neighboring gene Riboflavin transporter Neighboring gene Ferrochelatase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. RNA-seq analysis of Drosophila clock and non-clock neurons reveals neuron-specific cycling and novel candidate neuropeptides. Abruzzi KC, et al. PLoS Genet, 2017 Feb. PMID 28182648, Free PMC Article
    2. Identification of GOLPH3 Partners in Drosophila Unveils Potential Novel Roles in Tumorigenesis and Neural Disorders. Sechi S, et al. Cells, 2021 Sep 6. PMID 34571985, Free PMC Article
    3. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article
    4. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208
    5. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article

    See all (21) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG1971-PA
    CG1971-PB
    CG1971-PC
    CG1971-PD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      31805468..31806769
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_143643.3 → NP_651900.1  uncharacterized protein Dmel_CG1971, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651900.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q86NY9, Q9V9T0
      Related
      FBpp0085206

    2. NM_170578.3 → NP_733457.1  uncharacterized protein Dmel_CG1971, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_733457.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q86NY9, Q8IMG0
      Related
      FBpp0085207

    3. NM_001260464.1 → NP_001247393.1  uncharacterized protein Dmel_CG1971, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001247393.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q86NY9, Q8IMG0

    4. NM_001300699.1 → NP_001287628.1  uncharacterized protein Dmel_CG1971, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287628.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q86NY9, Q8IMG0
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q86NY9 Q86NY9
    Q8IMG0 Q8IMG0
    Q9V9T0 Q9V9T0

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