U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    sqz squeeze [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42300, updated on 9-Dec-2024

    Summary

    Official Symbol
    sqzprovided by FlyBase
    Official Full Name
    squeezeprovided by FlyBase
    Primary source
    FLYBASE:FBgn0010768
    Locus tag
    Dmel_CG5557
    See related
    AllianceGenome:FB:FBgn0010768
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-WO0118547.697; CG5557; Dmel\CG5557; l(3)02102; Sqz; SQZ
    Summary
    Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in dendrite guidance and neuroblast development. Is expressed in several structures, including Leucokinin neurons; anterior-posterior subdivision of organism; apterous-expressing neuron of the lateral cluster of the thorax; central nervous system; and ganglia. Orthologous to human ZNF362 (zinc finger protein 362) and ZNF384 (zinc finger protein 384). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See sqz in Genome Data Viewer
    Location:
    91F4-91F4; 3-66 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (19164211..19170576)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (14989933..14996298)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene nanos Neighboring gene Nop2/Sun-like domain containing protein 5 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    squeeze
    Names
    CG5557-PA
    sqz-PA

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      19164211..19170576
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_079679.3NP_524403.1  squeeze [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524403.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8MT44, Q9U9A8, Q9VDZ3
      UniProtKB/TrEMBL
      U3PU53
      Related
      FBpp0083147
      Conserved Domains (4) summary
      sd00017
      Location:160180
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:186208
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:200227
      zf-H2C2_2; Zinc-finger double domain
      pfam15909
      Location:191271
      zf-C2H2_8; C2H2-type zinc ribbon