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    retinin retinin [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 53564, updated on 17-Dec-2024

    Summary

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    Official Symbol
    retininprovided by FlyBase
    Official Full Name
    retininprovided by FlyBase
    Primary source
    FLYBASE:FBgn0040074
    Locus tag
    Dmel_CG13057
    See related
    AllianceGenome:FB:FBgn0040074
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    4A11; CG13057; Dmel\CG13057
    Summary
    A structural constituent of eye lens. Located in extracellular space. Is expressed in adult head; cone cell; cornea; organism; and primary pigment cell. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See retinin in Genome Data Viewer
    Location:
    72E1-72E1; 3-44 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (16331933..16332789)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (16325033..16325889)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR45893

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Targeted gene mutations in Drosophila. Ballinger DG, et al. Proc Natl Acad Sci U S A, 1989 Dec. PMID 2556711, Free PMC Article
    2. Light Polarization by Biological Nanocoatings. Kryuchkov M, et al. ACS Appl Mater Interfaces, 2021 May 26. PMID 33974394
    3. Characterization of the Drosophila melanogaster retinin gene encoding a cornea-specific protein. Kim E, et al. Insect Mol Biol, 2008 Sep. PMID 18828839
    4. Bactericidal and Antiviral Bionic Metalized Nanocoatings. Kryuchkov M, et al. Nanomaterials (Basel), 2022 May 30. PMID 35683724, Free PMC Article
    5. The cuticular nature of corneal lenses in Drosophila melanogaster. Stahl AL, et al. Dev Genes Evol, 2017 Jul. PMID 28477155, Free PMC Article

    See all (37) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Western blot analysis and immunohistochemical studies of D. melanogaster eyes suggest that retinin is a cornea-specific protein.
      Title: Characterization of the Drosophila melanogaster retinin gene encoding a cornea-specific protein.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables structural constituent of eye lens IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular space IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    retinin
    Names
    CG13057-PA
    retinin-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      16331933..16332789
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_080256.4 → NP_524995.2  retinin [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524995.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8SYA5, Q95TE5, Q9N2Q4, Q9VV36
      Related
      FBpp0075134
      Conserved Domains (1) summary
      pfam04527
      Location:122 → 169
      Retinin_C; Drosophila Retinin like protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q95TE7 Q95TE7
    Q9VV36.2 Q9VV36

    Gene LinkOut

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