U.S. flag

An official website of the United States government

Links from GEO Profiles

    • Showing Current items.

    Arl6IP1 ADP-ribosylation factor-like 6 interacting protein 1 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42027, updated on 9-Dec-2024

    Summary

    Official Symbol
    Arl6IP1provided by FlyBase
    Official Full Name
    ADP-ribosylation factor-like 6 interacting protein 1provided by FlyBase
    Primary source
    FLYBASE:FBgn0038453
    Locus tag
    Dmel_CG10326
    See related
    AllianceGenome:FB:FBgn0038453
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Al6IP1; ARL6IP1; CG10326; Dmel\CG10326
    Summary
    Involved in endoplasmic reticulum tubular network membrane organization and mitochondrion organization. Is active in endoplasmic reticulum tubular network. Is expressed in several structures, including adult head; anterior endoderm; anterior endoderm anlage; ganglia; and mesoderm. Used to study hereditary spastic paraplegia and hereditary spastic paraplegia 61. Human ortholog(s) of this gene implicated in hereditary spastic paraplegia 61. Orthologous to human ARL6IP1 (ADP ribosylation factor like GTPase 6 interacting protein 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Arl6IP1 in Genome Data Viewer
    Location:
    89D6-89D6; 3-59 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (16643605..16645171)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (12469327..12470893)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Fasciclin 1 Neighboring gene nonA-like Neighboring gene uncharacterized protein Neighboring gene Chaperonin containing TCP1 subunit 3 Neighboring gene Methyltransferase like 4

    Genomic regions, transcripts, and products

    Interactions

    General gene information

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    is_active_in endoplasmic reticulum tubular network PubMed 
    is_active_in membrane  

    General protein information

    Preferred Names
    ADP-ribosylation factor-like 6 interacting protein 1
    Names
    Arl6IP1-PA
    Arl6IP1-PB
    CG10326-PA
    CG10326-PB

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      16643605..16645171
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142313.3 → NP_650570.1  ADP-ribosylation factor-like 6 interacting protein 1, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_650570.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9VES1
      UniProtKB/TrEMBL
      A0A0B4KG41
      Related
      FBpp0082786
      Conserved Domains (1) summary
      pfam02453
      Location:29 → 187
      Reticulon; Reticulon
    2. NM_001275718.1 → NP_001262647.1  ADP-ribosylation factor-like 6 interacting protein 1, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262647.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9VES1
      UniProtKB/TrEMBL
      A0A0B4KG41
      Conserved Domains (1) summary
      pfam02453
      Location:29 → 187
      Reticulon; Reticulon
    External link. Please review our privacy policy.