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    SCPL12 serine carboxypeptidase-like 12 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816823, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SCPL12
    Official Full Name
    serine carboxypeptidase-like 12
    Primary source
    TAIR:AT2G22920
    Locus tag
    AT2G22920
    See related
    Araport:AT2G22920
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    serine carboxypeptidase-like 12; T20K9.13; T20K9_13
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    Genomic context

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    See SCPL12 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    15
    Sequence:
    Chromosome: 2; NC_003071.7 (9753631..9757600)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene N-acetyl-l-glutamate synthase 1 Neighboring gene UDP-Glycosyltransferase superfamily protein Neighboring gene uncharacterized protein Neighboring gene Defensin-like (DEFL) family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Markers

    NM_001202652.1
    NM_001335827.1
    NM_127857.5
    NM_179702.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables serine-type carboxypeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    serine carboxypeptidase-like 12
    NP_001189581.1
    • serine carboxypeptidase-like 12 (SCPL12); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 11 (TAIR:AT2G22970.1).
    NP_179876.1
    • serine carboxypeptidase-like 12 (SCPL12); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: stem, inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 11 (TAIR:AT2G22970.1); Has 4008 Blast hits to 3906 proteins in 455 species: Archae - 0; Bacteria - 499; Metazoa - 649; Fungi - 844; Plants - 1574; Viruses - 0; Other Eukaryotes - 442 (source: NCBI BLink).
    NP_850033.1
    • serine carboxypeptidase-like 12 (SCPL12); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: stem, inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 11 (TAIR:AT2G22970.3); Has 3940 Blast hits to 3855 proteins in 454 species: Archae - 0; Bacteria - 499; Metazoa - 627; Fungi - 829; Plants - 1550; Viruses - 0; Other Eukaryotes - 435 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      9753631..9757600
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001202652.1 → NP_001189581.1  serine carboxypeptidase-like 12 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189581.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4IKI5
      Conserved Domains (1) summary
      cl08270
      Location:1 → 256
      Peptidase_S10; Serine carboxypeptidase

    2. NM_127857.5 → NP_179876.1  serine carboxypeptidase-like 12 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179876.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O81009, Q3EBW1
      UniProtKB/TrEMBL
      A0A178VR71, A0A5S9X0N5
      Conserved Domains (1) summary
      cl08270
      Location:13 → 435
      Peptidase_S10; Serine carboxypeptidase

    3. NM_001335827.1 → NP_001325019.1  serine carboxypeptidase-like 12 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B1W3

    4. NM_179702.1 → NP_850033.1  serine carboxypeptidase-like 12 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850033.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2EB37
      Conserved Domains (1) summary
      cl08270
      Location:13 → 395
      Peptidase_S10; Serine carboxypeptidase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O81009.1

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