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    Integral membrane HRF1 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839973, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Integral membrane HRF1 family protein
    Primary source
    TAIR:AT1G30890
    Locus tag
    AT1G30890
    See related
    Araport:AT1G30890
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F17F8.24
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (10994243..10996223)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene RING/U-box superfamily protein Neighboring gene Peroxidase superfamily protein Neighboring gene uncharacterized protein Neighboring gene VACUOLAR SORTING RECEPTOR 6 Neighboring gene Molybdenum cofactor sulfurase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001084164.1
    NM_102826.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Integral membrane HRF1 family protein
    NP_001077633.1
    • Integral membrane HRF1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Hrf1 (InterPro:IPR005578); BEST Arabidopsis thaliana protein match is: Integral membrane HRF1 family protein (TAIR:AT3G59500.1); Has 474 Blast hits to 474 proteins in 183 species: Archae - 0; Bacteria - 0; Metazoa - 204; Fungi - 142; Plants - 75; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).
    NP_564367.1
    • Integral membrane HRF1 family protein; CONTAINS InterPro DOMAIN/s: Hrf1 (InterPro:IPR005578); BEST Arabidopsis thaliana protein match is: Integral membrane HRF1 family protein (TAIR:AT3G59500.1); Has 474 Blast hits to 474 proteins in 183 species: Archae - 0; Bacteria - 0; Metazoa - 204; Fungi - 142; Plants - 75; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      10994243..10996223
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102826.4 → NP_564367.1  Integral membrane HRF1 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564367.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WAJ0, Q94BQ9, Q9FYH6
      Conserved Domains (1) summary
      pfam03878
      Location:42 → 261
      YIF1

    2. NM_001084164.1 → NP_001077633.1  Integral membrane HRF1 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077633.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WAJ0, Q94BQ9, Q9FYH6
      Conserved Domains (1) summary
      pfam03878
      Location:42 → 261
      YIF1
    Nucleotide Protein
    Heading Accession and Version

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