U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CLE26 CLAVATA3/ESR-RELATED 26 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843334, updated on 18-Sep-2024

    Summary

    Official Symbol
    CLE26
    Official Full Name
    CLAVATA3/ESR-RELATED 26
    Primary source
    TAIR:AT1G69970
    Locus tag
    AT1G69970
    See related
    Araport:AT1G69970
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    CLAVATA3/ESR-RELATED 26; F20P5.29; F20P5_29
    Summary
    Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. Can not replace CLV3 function in vivo.
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See CLE26 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (26352563..26354613, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene serine/threonine protein phosphatase 2A Neighboring gene ncRNA Neighboring gene structural polyprotein Neighboring gene miscRNA

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_001124103.2
    NM_105666.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables receptor serine/threonine kinase binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables receptor serine/threonine kinase binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    involved_in cell-cell signaling involved in cell fate commitment ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in maintenance of root meristem identity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in phloem development IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in regulation of cell differentiation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in apoplast ISM
    Inferred from Sequence Model
    more info
    PubMed 
    located_in apoplast ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    CLAVATA3/ESR-RELATED 26
    NP_001117575.1
    • CLAVATA3/ESR-RELATED 26 (CLE26); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_177155.1
    • CLAVATA3/ESR-RELATED 26 (CLE26); Has 12 Blast hits to 12 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      26352563..26354613 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001124103.2NP_001117575.1  CLAVATA3/ESR-RELATED 26 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001117575.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WTF0, A0A654EST1
    2. NM_105666.2NP_177155.1  CLAVATA3/ESR-RELATED 26 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177155.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0MEF4, B3H6F4, O04547