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    Lung seven transmembrane receptor family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842464, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Lung seven transmembrane receptor family protein
    Primary source
    TAIR:AT1G61670
    Locus tag
    AT1G61670
    See related
    Araport:AT1G61670
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T13M11.2; T13M11_2
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (22769364..22772426)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein Neighboring gene serine protease, putative (Protein of unknown function, DUF538) Neighboring gene ncRNA Neighboring gene terpene synthase 14 Neighboring gene miscRNA Neighboring gene Defensin-like (DEFL) family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Label-free protein quantification for plant Golgi protein localization and abundance. Nikolovski N, et al. Plant Physiol, 2014 Oct. PMID 25122472, Free PMC Article
    2. Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis. Parsons HT, et al. Plant Physiol, 2012 May. PMID 22430844, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001333999.1
    NM_104849.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus HDA PubMed 
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Lung seven transmembrane receptor family protein
    NP_001319287.1
    • Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT1G10980.1); Has 653 Blast hits to 651 proteins in 175 species: Archae - 0; Bacteria - 2; Metazoa - 278; Fungi - 148; Plants - 158; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      22769364..22772426
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001333999.1 → NP_001319287.1  Lung seven transmembrane receptor family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W5T5, A0A384KW44, A0A5S9WNU3, Q8GYD0
      Conserved Domains (1) summary
      pfam06814
      Location:178 → 464
      Lung_7-TM_R; Lung seven transmembrane receptor

    2. NM_104849.4 → NP_176360.2  Lung seven transmembrane receptor family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176360.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W5T5, A0A384KW44, A0A5S9WNU3, Q8GYD0
      Conserved Domains (1) summary
      pfam06814
      Location:178 → 464
      Lung_7-TM_R; Lung seven transmembrane receptor
    Nucleotide Protein
    Heading Accession and Version

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