U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    sks7 SKU5 similar 7 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838788, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    sks7
    Official Full Name
    SKU5 similar 7
    Primary source
    TAIR:AT1G21860
    Locus tag
    AT1G21860
    See related
    Araport:AT1G21860
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    SKU5 similar 7; T26F17.7; T26F17_7
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See sks7 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    8
    Sequence:
    Chromosome: 1; NC_003070.9 (7671028..7674215, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene urease accessory protein F Neighboring gene SKU5 similar 8 Neighboring gene Plant thionin family protein Neighboring gene Plant thionin family protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables copper ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    SKU5 similar 7
    NP_173604.1
    • SKU5 similar 7 (sks7); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: plant-type cell wall; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 8 (TAIR:AT1G21850.1); Has 5059 Blast hits to 4986 proteins in 916 species: Archae - 16; Bacteria - 1499; Metazoa - 256; Fungi - 1883; Plants - 1282; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      7671028..7674215 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102034.1 → NP_173604.1  SKU5 similar 7 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173604.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9VGR8, A0A654EMQ2, Q9SFF1
      Conserved Domains (1) summary
      PLN02991
      Location:1 → 538
      PLN02991; oxidoreductase
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools