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    Lung seven transmembrane receptor family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837641, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Lung seven transmembrane receptor family protein
    Primary source
    TAIR:AT1G10980
    Locus tag
    AT1G10980
    See related
    Araport:AT1G10980
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T19D16.10; T19D16_10
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (3667224..3669935, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene transmembrane nine 1 Neighboring gene ferredoxin 1 Neighboring gene zinc transporter Neighboring gene uncharacterized protein Neighboring gene Seven transmembrane MLO family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. Carter C, et al. Plant Cell, 2004 Dec. PMID 15539469, Free PMC Article
    2. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    • At1g10980_Arabidopsis_lyrata_ssp._lyrata_CAN1 (e-PCR)
    • At1g10980_Arabidopsis_lyrata_ssp._petraea_GER1 (e-PCR)
    NM_100973.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plant-type vacuole HDA PubMed 
    located_in plasmodesma HDA PubMed 

    General protein information

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    Preferred Names
    Lung seven transmembrane receptor family protein
    NP_172567.1
    • Lung seven transmembrane receptor family protein; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT1G61670.1); Has 670 Blast hits to 669 proteins in 172 species: Archae - 0; Bacteria - 0; Metazoa - 291; Fungi - 146; Plants - 175; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      3667224..3669935 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100973.3 → NP_172567.1  Lung seven transmembrane receptor family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172567.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WE66, A0A5S9TR18, A0A7G2DRX2, O04088
      Conserved Domains (1) summary
      pfam06814
      Location:179 → 461
      Lung_7-TM_R; Lung seven transmembrane receptor
    Nucleotide Protein
    Heading Accession and Version

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