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    EXO70D1 exocyst subunit exo70 family protein D1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843579, updated on 18-Sep-2024

    Summary

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    Official Symbol
    EXO70D1
    Official Full Name
    exocyst subunit exo70 family protein D1
    Primary source
    TAIR:AT1G72470
    Locus tag
    AT1G72470
    See related
    Araport:AT1G72470
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATEXO70D1; exocyst subunit exo70 family protein D1; T10D10.6; T10D10_6
    Summary
    A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.
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    Genomic context

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    See EXO70D1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (27283628..27285973)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Leucine-rich repeat protein kinase family protein Neighboring gene Lung seven transmembrane receptor family protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. EXPO, an exocyst-positive organelle distinct from multivesicular endosomes and autophagosomes, mediates cytosol to cell wall exocytosis in Arabidopsis and tobacco cells. Wang J, et al. Plant Cell, 2010 Dec. PMID 21193573, Free PMC Article
    2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_105906.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables phosphatidylinositol-4,5-bisphosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of exocyst IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    exocyst subunit exo70 family protein D1
    NP_177391.1
    • exocyst subunit exo70 family protein D1 (EXO70D1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein D2 (TAIR:AT1G54090.1); Has 916 Blast hits to 905 proteins in 131 species: Archae - 0; Bacteria - 0; Metazoa - 142; Fungi - 103; Plants - 652; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      27283628..27285973
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105906.4 → NP_177391.1  exocyst subunit exo70 family protein D1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177391.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W795, A0A5S9WRU4, Q0WPK8, Q9C9E5
      Conserved Domains (1) summary
      pfam03081
      Location:247 → 617
      Exo70; Exo70 exocyst complex subunit
    Nucleotide Protein
    Heading Accession and Version

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