U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    integrator complex subunit-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839367, updated on 18-Sep-2024

    Summary

    Official Full Name
    integrator complex subunit-like protein
    Primary source
    TAIR:AT1G02330
    Locus tag
    AT1G02330
    See related
    Araport:AT1G02330
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T6A9.2; T6A9_2
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (461946..463618, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Cysteine proteinases superfamily protein Neighboring gene ncRNA Neighboring gene Glycosyl hydrolase superfamily protein Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene germin-like protein subfamily 2 member 2 precursor Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    integrator complex subunit-like protein
    NP_563649.1
    • CONTAINS InterPro DOMAIN/s: Hepatocellular carcinoma-associated antigen 59 (InterPro:IPR010756); Has 1239 Blast hits to 998 proteins in 204 species: Archae - 4; Bacteria - 71; Metazoa - 421; Fungi - 109; Plants - 87; Viruses - 5; Other Eukaryotes - 542 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      461946..463618 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100114.5NP_563649.1  integrator complex subunit-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_563649.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4HVZ5, Q94JU5, Q9FZ28
      UniProtKB/TrEMBL
      A0A178WFW1, A0A5S9S6K7, A0A7G2DPS9
      Conserved Domains (1) summary
      pfam07052
      Location:87181
      Hep_59; Hepatocellular carcinoma-associated antigen 59