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    IAA16 indoleacetic acid-induced protein 16 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819633, updated on 18-Sep-2024

    Summary

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    Official Symbol
    IAA16
    Official Full Name
    indoleacetic acid-induced protein 16
    Primary source
    TAIR:AT3G04730
    Locus tag
    AT3G04730
    See related
    Araport:AT3G04730
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F7O18.22; F7O18_22; indoleacetic acid-induced protein 16
    Summary
    early auxin-induced (IAA16)
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    Genomic context

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    See IAA16 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    5
    Sequence:
    Chromosome: 3; NC_003074.8 (1288155..1290891, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene pathogenesis-related 4 Neighboring gene RALF-like 21 Neighboring gene RNA polymerase II transcription mediator

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A gain-of-function mutation in IAA16 confers reduced responses to auxin and abscisic acid and impedes plant growth and fertility. Rinaldi MA, et al. Plant Mol Biol, 2012 Jul. PMID 22580954, Free PMC Article
    2. Protein-protein interactions among the Aux/IAA proteins. Kim J, et al. Proc Natl Acad Sci U S A, 1997 Oct 28. PMID 9342315, Free PMC Article
    3. Genetics of Aux/IAA and ARF action in plant growth and development. Liscum E, et al. Plant Mol Biol, 2002 Jun-Jul. PMID 12036262
    4. Protein-protein interaction and gene co-expression maps of ARFs and Aux/IAAs in Arabidopsis. Piya S, et al. Front Plant Sci, 2014. PMID 25566309, Free PMC Article
    5. The auxin signalling network translates dynamic input into robust patterning at the shoot apex. Vernoux T, et al. Mol Syst Biol, 2011 Jul 5. PMID 21734647, Free PMC Article

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. identified iaa16-1, a dominant gain-of-function mutation in IAA16 (At3g04730), in a novel screen for reduced root responsiveness to abscisic acid
      Title: A gain-of-function mutation in IAA16 confers reduced responses to auxin and abscisic acid and impedes plant growth and fertility.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_111345.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables identical protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables transcription cis-regulatory region binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within response to auxin TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    indoleacetic acid-induced protein 16
    NP_187124.1
    • indoleacetic acid-induced protein 16 (IAA16); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid 7 (TAIR:AT3G23050.1); Has 1752 Blast hits to 1751 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1751; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      1288155..1290891 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111345.3 → NP_187124.1  indoleacetic acid-induced protein 16 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187124.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O24407
      UniProtKB/TrEMBL
      A0A178VMM3, A0A384LFG7, Q0WNJ2
      Conserved Domains (1) summary
      pfam02309
      Location:6 → 227
      AUX_IAA; AUX/IAA family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O24407.1

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