U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    TOC75-I translocon outer membrane complex 75-I [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 840488, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    TOC75-I
    Official Full Name
    translocon outer membrane complex 75-I
    Primary source
    TAIR:AT1G35860
    Locus tag
    AT1G35860
    See related
    Araport:AT1G35860
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F10O5.4; F10O5_4; translocon outer membrane complex 75-I
    Summary
    TOC75 pseudogene due to a 5.4-kb gypsy/Ty3-related retrotransposon inserted at the 5' end of the gene
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TOC75-I in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    8
    Sequence:
    Chromosome: 1; NC_003070.9 (13332047..13334050, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pumilio 17 Neighboring gene pseudo Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Toc159- and Toc75-independent import of a transit sequence-less precursor into the inner envelope of chloroplasts. Miras S, et al. J Biol Chem, 2007 Oct 5. PMID 17636260
    2. A molecular-genetic study of the Arabidopsis Toc75 gene family. Baldwin A, et al. Plant Physiol, 2005 Jun. PMID 15908591, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    translocon outer membrane complex 75-I
    NP_174821.1
    • translocon outer membrane complex 75-I (TOC75-I); LOCATED IN: outer membrane; CONTAINS InterPro DOMAIN/s: Bacterial surface antigen (D15) (InterPro:IPR000184); BEST Arabidopsis thaliana protein match is: translocon at the outer envelope membrane of chloroplasts 75-III (TAIR:AT3G46740.1); Has 497 Blast hits to 421 proteins in 90 species: Archae - 0; Bacteria - 217; Metazoa - 0; Fungi - 0; Plants - 162; Viruses - 0; Other Eukaryotes - 118 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      13332047..13334050 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103285.1 → NP_174821.1  translocon outer membrane complex 75-I [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_174821.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2DVG0, Q9C8B7
      Conserved Domains (2) summary
      PLN03138
      Location:3 → 399
      PLN03138; Protein TOC75; Provisional
      pfam01103
      Location:311 → 395
      Bac_surface_Ag; Surface antigen
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools