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    EDA8 Putative membrane lipoprotein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827417, updated on 18-Sep-2024

    Summary

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    Official Symbol
    EDA8
    Official Full Name
    Putative membrane lipoprotein
    Primary source
    TAIR:AT4G00310
    Locus tag
    AT4G00310
    See related
    Araport:AT4G00310
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    A_IG005I10.17; A_IG005I10_17; EMBRYO SAC DEVELOPMENT ARREST 8; F5I10.17; F5I10_17; MATERNAL EFFECT EMBRYO ARREST 46; MEE46
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    Genomic context

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    See EDA8 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    3
    Sequence:
    Chromosome: 4; NC_003075.7 (133643..135502)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene RING/U-box superfamily protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene F-box/RNI-like/FBD-like domains-containing protein Neighboring gene F-box/RNI-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and molecular identification of genes required for female gametophyte development and function in Arabidopsis. Pagnussat GC, et al. Development, 2005 Feb. PMID 15634699
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001036486.3
    NM_116253.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within embryo development ending in seed dormancy IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within megagametogenesis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Putative membrane lipoprotein
    NP_001031563.1
    • EMBRYO SAC DEVELOPMENT ARREST 8 (EDA8); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_567168.1
    • EMBRYO SAC DEVELOPMENT ARREST 8 (EDA8); Has 49 Blast hits to 49 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 8; Plants - 36; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      133643..135502
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116253.3 → NP_567168.1  Putative membrane lipoprotein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567168.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UZ29, A0A5S9XNK4, A0A654FKT4, O23071

    2. NM_001036486.3 → NP_001031563.1  Putative membrane lipoprotein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031563.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UZ29, A0A5S9XNK4, A0A654FKT4, O23071
    Nucleotide Protein
    Heading Accession and Version

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