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    SEC7-like guanine nucleotide exchange family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829691, updated on 18-Sep-2024

    Summary

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    Official Full Name
    SEC7-like guanine nucleotide exchange family protein
    Primary source
    TAIR:AT4G35380
    Locus tag
    AT4G35380
    See related
    Araport:AT4G35380
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F23E12.60; F23E12_60
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    10
    Sequence:
    Chromosome: 4; NC_003075.7 (16819792..16826147)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene exodeoxyribonuclease VII, small subunit Neighboring gene miscRNA Neighboring gene AT-hook protein of GA feedback 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Delivery of endocytosed proteins to the cell-division plane requires change of pathway from recycling to secretion. Richter S, et al. Elife, 2014 Apr 8. PMID 24714496, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_119704.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of ARF protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in trans-Golgi network membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SEC7-like guanine nucleotide exchange family protein
    NP_195264.2
    • SEC7-like guanine nucleotide exchange family protein; FUNCTIONS IN: binding, ARF guanyl-nucleotide exchange factor activity, guanyl-nucleotide exchange factor activity; INVOLVED IN: regulation of ARF protein signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904), Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF1981, SEC7 associated (InterPro:IPR015403); BEST Arabidopsis thaliana protein match is: SEC7-like guanine nucleotide exchange family protein (TAIR:AT4G38200.1); Has 2864 Blast hits to 2569 proteins in 246 species: Archae - 2; Bacteria - 36; Metazoa - 1544; Fungi - 584; Plants - 258; Viruses - 0; Other Eukaryotes - 440 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      16819792..16826147
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001342349.1 → NP_001328406.1  SEC7-like guanine nucleotide exchange family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B4J7

    2. NM_119704.4 → NP_195264.2  SEC7-like guanine nucleotide exchange family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195264.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JN05, O65490
      UniProtKB/TrEMBL
      A0A178V867, A0A5S9XYW4, A0A654FVS1
      Conserved Domains (1) summary
      PLN03076
      Location:11 → 1705
      PLN03076; ARF guanine nucleotide exchange factor (ARF-GEF); Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4JN05.1

    Gene LinkOut

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